SCOPe 2.07: Domain d5pdja1: 5pdj A:1858-1970

Lineage for d5pdja1 (5pdj A:1858-1970)

1. Root: SCOPe 2.07

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.29: Bromodomain-like [47363] (15 superfamilies)
   4 helices; bundle; minor mirror variant of up-and-down topology

4. Superfamily a.29.2: Bromodomain [47370] (2 families)

5. Family a.29.2.0: automated matches [191428] (1 protein)
   not a true family

6. Protein automated matches [190615] (11 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [187641] (716 PDB entries)

8. Domain d5pdja1: 5pdj A:1858-1970 [331748]
   Other proteins in same PDB: d5pdja2
   automated match to d3uv2a_
   complexed with edo

Details for d5pdja1

PDB Entry: 5pdj, 1.84 Å

PDB Description: pandda analysis group deposition -- crystal structure of baz2b after initial refinement with no ligand modelled (structure 76)

PDB Compounds: (A:) Bromodomain adjacent to zinc finger domain protein 2B

SCOPe Domain Sequences for d5pdja1:

Sequence; same for both SEQRES and ATOM records:

>d5pdja1 a.29.2.0 (A:1858-1970) automated matches {Human (Homo sapiens) [TaxId: 9606]}
svkkpkrddskdlalcsmiltemethedawpfllpvnlklvpgykkvikkpmdfstirek
lssgqypnletfaldvrlvfdncetfneddsdigraghnmrkyfekkwtdtfk

Timeline for d5pdja1:

• d5pdja1 first appeared in SCOPe 2.06