SCOPe 2.08: Domain d5gonf2: 5gon F:77-378

Lineage for d5gonf2 (5gon F:77-378)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.142: ATP-grasp [56058] (2 superfamilies)
   Consists of two subdomains with different alpha+beta folds
   shares functional and structural similarities with the PIPK and protein kinase superfamilies

4. Superfamily d.142.1: Glutathione synthetase ATP-binding domain-like [56059] (11 families)

5. Family d.142.1.10: Tubulin tyrosine ligase (TTL) C-terminal domain-like [310626] (2 proteins)
   Pfam PF03133; PubMed 22020298

6. Protein Tubulin tyrosine ligase (TTL) C-terminal domain [310728] (3 species)

7. Species Chicken (Gallus gallus) [TaxId:9031] [311385] (176 PDB entries)

8. Domain d5gonf2: 5gon F:77-378 [331643]
   Other proteins in same PDB: d5gona1, d5gona2, d5gonb1, d5gonb2, d5gonc1, d5gonc2, d5gond1, d5gond2, d5gone_, d5gonf1
   automated match to d3tiia2
   complexed with 6zr, ca, gdp, gol, gtp, imd, mes, mg

Details for d5gonf2

PDB Entry: 5gon, 2.48 Å

PDB Description: structures of a beta-lactam bridged analogue in complex with tubulin

PDB Compounds: (F:) Uncharacterized protein

SCOPe Domain Sequences for d5gonf2:

Sequence, based on SEQRES records:

>d5gonf2 d.142.1.10 (F:77-378) Tubulin tyrosine ligase (TTL) C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
lvkliktspelsesctwfpesyviyptnlktpvapaqngirhlinntrtderevflaayn
rrregregnvwiakssagakgegilisseaselldfideqgqvhviqkylekplllepgh
rkfdirswvlvdhlyniylyregvlrtssepynsanfqdktchltnhciqkeysknygry
eegnemffeefnqylmdalnttlensillqikhiirsclmciepaistkhlhyqsfqlfg
fdfmvdeelkvwlievngapacaqklyaelcqgivdvaissvfpladtgqktsqptsifi
kl

Sequence, based on observed residues (ATOM records):

>d5gonf2 d.142.1.10 (F:77-378) Tubulin tyrosine ligase (TTL) C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
lvkliktspelsesctwfpesyviyptderevflaayngnvwiaksisseaselldfihv
iqkylekplllepghrkfdirswvlvdhlyniylyregvlrtssepynsadktchltnhc
iqkeysnygryeegnemffeefnqylmdalnttlensillqikhiirsclmciepaistk
hlhyqsfqlfgfdfmvdeelkvwlievngapacaqklyaelcqgivdvaissvfplasif
ikl

Timeline for d5gonf2:

• d5gonf2 first appeared in SCOPe 2.06
  
• d5gonf2 appears in SCOPe 2.07