Lineage for Species: Yersinia pestis [TaxId: 632]

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2413227Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2419618Superfamily c.1.9: Metallo-dependent hydrolases [51556] (19 families) (S)
    the beta-sheet barrel is similarly distorted and capped by a C-terminal helix
    has transition metal ions bound inside the barrel
  5. 2420241Family c.1.9.0: automated matches [191327] (1 protein)
    not a true family
  6. 2420242Protein automated matches [190150] (26 species)
    not a true protein
  7. 2420452Species Yersinia pestis [TaxId:632] [331414] (2 PDB entries)

PDB entries in Species: Yersinia pestis [TaxId: 632]:

  1. Domain(s) for 5v0g:
    1. 2420453Domain d5v0ga_: 5v0g A: [331415]
      Other proteins in same PDB: d5v0gc2
      automated match to d4lfyb_
      complexed with unl, zn
    2. 2420454Domain d5v0gb_: 5v0g B: [331434]
      Other proteins in same PDB: d5v0gc2
      automated match to d4lfyb_
      complexed with unl, zn
    3. 2420455Domain d5v0gc1: 5v0g C:1-347 [331423]
      Other proteins in same PDB: d5v0gc2
      automated match to d4lfyb_
      complexed with unl, zn
    4. 2420456Domain d5v0gd_: 5v0g D: [331483]
      Other proteins in same PDB: d5v0gc2
      automated match to d4lfyb_
      complexed with unl, zn
    5. 2420457Domain d5v0ge_: 5v0g E: [331518]
      Other proteins in same PDB: d5v0gc2
      automated match to d4lfyb_
      complexed with unl, zn
    6. 2420458Domain d5v0gf_: 5v0g F: [331470]
      Other proteins in same PDB: d5v0gc2
      automated match to d4lfyb_
      complexed with unl, zn
  2. Domain(s) for 6cty:
    1. 3050205Domain d6ctya_: 6cty A: [350267]
      Other proteins in same PDB: d6ctyc2
      automated match to d4lfyb_
      complexed with mlt, zn
    2. 3050220Domain d6ctyd_: 6cty D: [350282]
      Other proteins in same PDB: d6ctyc2
      automated match to d4lfyb_
      complexed with mlt, zn
    3. 3050223Domain d6ctye_: 6cty E: [350285]
      Other proteins in same PDB: d6ctyc2
      automated match to d4lfyb_
      complexed with mlt, zn
    4. 3050253Domain d6ctyf_: 6cty F: [350315]
      Other proteins in same PDB: d6ctyc2
      automated match to d4lfyb_
      complexed with mlt, zn
    5. 3050266Domain d6ctyc1: 6cty C:1-347 [350328]
      Other proteins in same PDB: d6ctyc2
      automated match to d4lfyb_
      complexed with mlt, zn
    6. 3050313Domain d6ctyb_: 6cty B: [350375]
      Other proteins in same PDB: d6ctyc2
      automated match to d4lfyb_
      complexed with mlt, zn

More info for Species Yersinia pestis [TaxId:632] from c.1.9.0 automated matches

Timeline for Species Yersinia pestis [TaxId:632] from c.1.9.0 automated matches: