SCOPe 2.07: Domain d5n6sd_: 5n6s D:

Lineage for d5n6sd_ (5n6s D:)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.4: Family 1 of glycosyl hydrolase [51521] (6 proteins)

6. Protein Beta-glucosidase A [51528] (10 species)

7. Species Thermotoga maritima [TaxId:2336] [89475] (8 PDB entries)
   Uniprot Q08638

8. Domain d5n6sd_: 5n6s D: [330440]
   automated match to d1oifa_
   complexed with 8p5, act, cl, edo, imd, peg, pge

Details for d5n6sd_

PDB Entry: 5n6s, 2.1 Å

PDB Description: thermotoga maritima family 1 glycoside hydrolase complexed with carba- cyclophellitol transition state mimic

PDB Compounds: (D:) beta-glucosidase a

SCOPe Domain Sequences for d5n6sd_:

Sequence, based on SEQRES records:

>d5n6sd_ c.1.8.4 (D:) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]}
vkkfpegflwgvatasyqiegspladgagmsiwhtfshtpgnvkngdtgdvacdhynrwk
edieiieklgvkayrfsiswprilpegtgrvnqkgldfynriidtllekgitpfvtiyhw
dlpfalqlkggwanreiadwfaeysrvlfenfgdrvknwitlnepwvvaivghlygvhap
gmrdiyvafravhnllraharavkvfretvkdgkigivfnngyfepasekeediravrfm
hqfnnyplflnpiyrgdypelvlefareylpenykddmseiqekidfvglnyysghlvkf
dpdapakvsfverdlpktamgweivpegiywilkkvkeeynppevyitengaafddvvse
dgrvhdqnridylkahigqawkaiqegvplkgyfvwslldnfewaegyskrfgivyvdys
tqkrivkdsgywysnvvknngl

Sequence, based on observed residues (ATOM records):

>d5n6sd_ c.1.8.4 (D:) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]}
vkkfpegflwgvatasyqiegspladgagmsiwhtfshtpgnvkngdtgdvacdhynrwk
edieiieklgvkayrfsiswprilpegtgrvnqkgldfynriidtllekgitpfvtiyhw
dlpfalqlkggwanreiadwfaeysrvlfenfgdrvknwitlnepwvvaivghlygvhap
gmrdiyvafravhnllraharavkvfretvkdgkigivfnngyfepasekediravrfmh
qfnnyplflnpiyrgdypelvlefareylpenykddmseiqekidfvglnyysghlvkfd
pdapakvsfverdlpktamgweivpegiywilkkvkeeynppevyitengaafddvvrvh
dqnridylkahigqawkaiqegvplkgyfvwslldnfewaegyskrfgivyvdystqvky
wysnvvknngl

Timeline for d5n6sd_:

• d5n6sd_ first appeared in SCOPe 2.06
  
• d5n6sd_ appears in the current release, SCOPe 2.08