SCOPe 2.08: Domain d5jbsc_: 5jbs C:

Lineage for d5jbsc_ (5jbs C:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.17: Cystatin-like [54402] (7 superfamilies)
   Core: alpha-beta(4); helix packs against coiled antiparallel beta-sheet

4. Superfamily d.17.4: NTF2-like [54427] (31 families)
   has a beta-alpha(2)-beta insertion after the main helix

5. Family d.17.4.26: VirB8-like [160029] (2 proteins)
   Pfam PF04335

6. Protein automated matches [190553] (2 species)
   not a true protein

7. Species Brucella suis [TaxId:204722] [330344] (1 PDB entry)

8. Domain d5jbsc_: 5jbs C: [330369]
   automated match to d2bhma1
   complexed with cl, epe, gol, peg

Details for d5jbsc_

PDB Entry: 5jbs, 1.95 Å

PDB Description: conformational changes during monomer-to-dimer transition of brucella suis virb8

PDB Compounds: (C:) type IV secretion system protein virb8

SCOPe Domain Sequences for d5jbsc_:

Sequence, based on SEQRES records:

>d5jbsc_ d.17.4.26 (C:) automated matches {Brucella suis [TaxId: 204722]}
sydtvrdkywlsqyviaretydwytlqkdyetvgmlsspsegqsyasqfqgdkaldkqyg
snvrtsvtivsivpngkgigtvrfakttkrtnetgdgetthwiatigyqyvnpslmsesa
rltnplgfnvtsyrvdpe

Sequence, based on observed residues (ATOM records):

>d5jbsc_ d.17.4.26 (C:) automated matches {Brucella suis [TaxId: 204722]}
sydtvrdkywlsqyviaretydwytlqkdyetvgmlsspsegqsyasqfqvrtsvtivsi
vpngkgigtvrfakttkgdgetthwiatigyqyvnpslmsesarltnplgfnvtsyrvdp
e

Timeline for d5jbsc_:

• d5jbsc_ first appeared in SCOPe 2.06
  
• d5jbsc_ appears in SCOPe 2.07