SCOPe 2.06: Domain d5i06a_: 5i06 A:

Lineage for d5i06a_ (5i06 A:)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.20: tRNA-guanine transglycosylase [51713] (1 family)

5. Family c.1.20.1: tRNA-guanine transglycosylase [51714] (2 proteins)

6. Protein Queosine tRNA-guanine transglycosylase [51715] (3 species)
   contains zinc-binding subdomain

7. Species Zymomonas mobilis [TaxId:542] [51716] (113 PDB entries)
   Uniprot P28720

8. Domain d5i06a_: 5i06 A: [329742]
   automated match to d1q2ra_
   protein/RNA complex; complexed with e89, edo, gol, pge, zn

Details for d5i06a_

PDB Entry: 5i06, 1.36 Å

PDB Description: trna-guanine transglycosylase (tgt) in co-crystallized complex with 6- amino-4-[2-(4-methoxyphenyl)ethyl]-1,7-dihydro-8h-imidazo[4,5- g]quinazolin-8-one

PDB Compounds: (A:) Queuine tRNA-ribosyltransferase

SCOPe Domain Sequences for d5i06a_:

Sequence, based on SEQRES records:

>d5i06a_ c.1.20.1 (A:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 542]}
drprfsfsiaaregkartgtiemkrgvirtpafmpvgtaatvkalkpetvratgadiilg
ntyhlmlrpgaeriaklgglhsfmgwdrpiltdsggyqvmslssltkqseegvtfkshld
gsrhmlspersieiqhllgsdivmafdectpypatpsraassmersmrwakrsrdafdsr
keqaenaalfgiqqgsvfenlrqqsadalaeigfdgyavgglavgegqdemfrvldfsvp
mlpddkphylmgvgkpddivgavergidmfdcvlptrsgrngqaftwdgpinirnarfse
dlkpldsechcavcqkwsrayihhlirageilgamlmtehniafyqqlmqkirdsisegr
fsqfaqdfraryfar

Sequence, based on observed residues (ATOM records):

>d5i06a_ c.1.20.1 (A:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 542]}
drprfsfsiaaregkartgtiemkrgvirtpafmpvgtaatvkagadiilgntyhlmlrp
gaeriaklgglhsfmgwdrpiltdsggyqvmslstkqseegvtfkhmlspersieiqhll
gsdivmafdectpypatpsraassmersmrwakrsrdafdsrkeqaenaalfgiqqgsvf
enlrqqsadalaeigfdgyavgglavgegqdemfrvldfsvpmlpddkphylmgvgkpdd
ivgavergidmfdlptrsgrngqaftwdgpinirnarfsedlkpldsechcavcqkwsra
yihhlirageilgamlmtehniafyqqlmqkirdsisegrfsqfaqdfraryfar

Timeline for d5i06a_:

• d5i06a_ is new in SCOPe 2.06-stable
  
• d5i06a_ appears in SCOPe 2.07
  
• d5i06a_ appears in the current release, SCOPe 2.08