SCOPe 2.08: Domain d5m4ya1: 5m4y A:36-225

Lineage for d5m4ya1 (5m4y A:36-225)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.47: STAT-like [47654] (6 superfamilies)
   4 long helices; bundle, left-handed twist (coiled coil); right-handed superhelix

4. Superfamily a.47.2: t-snare proteins [47661] (1 family)

5. Family a.47.2.1: t-snare proteins [47662] (6 proteins)

6. Protein automated matches [191190] (5 species)
   not a true protein

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [329508] (2 PDB entries)

8. Domain d5m4ya1: 5m4y A:36-225 [329590]
   Other proteins in same PDB: d5m4ya2, d5m4yc2, d5m4ye2
   automated match to d1fioa_
   complexed with gol

Details for d5m4ya1

PDB Entry: 5m4y, 2.2 Å

PDB Description: crystal structure of the sec3/sso2 complex at 2.20 angstrom resolution

PDB Compounds: (A:) Protein SSO2

SCOPe Domain Sequences for d5m4ya1:

Sequence, based on SEQRES records:

>d5m4ya1 a.47.2.1 (A:36-225) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
dfvafmnkinsinanlsryeniinqidaqhkdlltqvseeqemelrrslddyisqatdlq
yqlkadikdaqrdglhdsnkqaqaencrqkflkliqdyriidsnykeeskeqakrqytii
qpeatdeeveaaindvngqqifsqallnanrrgeaktalaevqarhqellklektmaelt
qlfndmeelv

Sequence, based on observed residues (ATOM records):

>d5m4ya1 a.47.2.1 (A:36-225) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
dfvafmnkinsinanlsryeniinqidaqhkdlltqvseeqemelrrslddyisqatdlq
yqlkadikdaqrdglhdsnkqaqaencrqkflkliqdyriidsnykeeskeqakrqytii
qpeatdeeveaaindvngqktalaevqarhqellklektmaeltqlfndmeelv

Timeline for d5m4ya1:

• d5m4ya1 first appeared in SCOPe 2.06
  
• d5m4ya1 appears in SCOPe 2.07