SCOPe 2.08: Domain d5gzob1: 5gzo B:1-303

Lineage for d5gzob1 (5gzo B:1-303)

1. Root: SCOPe 2.08

2. Class f: Membrane and cell surface proteins and peptides [56835] (69 folds)

3. Fold f.10: Viral glycoprotein, central and dimerisation domains [56982] (1 superfamily)
   2 intertwined domains; all-beta and alpha+beta

4. Superfamily f.10.1: Viral glycoprotein, central and dimerisation domains [56983] (2 families)

5. Family f.10.1.0: automated matches [227258] (1 protein)
   not a true family

6. Protein automated matches [227047] (11 species)
   not a true protein

7. Species Zika virus [TaxId:64320] [317278] (7 PDB entries)

8. Domain d5gzob1: 5gzo B:1-303 [328585]
   Other proteins in same PDB: d5gzoa2, d5gzob2, d5gzoc1, d5gzoc2, d5gzod1, d5gzod2, d5gzoh1, d5gzoh2, d5gzol1, d5gzol2
   automated match to d4gsxa1

Details for d5gzob1

PDB Entry: 5gzo, 2.76 Å

PDB Description: structure of neutralizing antibody bound to zika envelope protein

PDB Compounds: (B:) Genome polyprotein

SCOPe Domain Sequences for d5gzob1:

Sequence, based on SEQRES records:

>d5gzob1 f.10.1.0 (B:1-303) automated matches {Zika virus [TaxId: 64320]}
ircigvsnrdfvegmsggtwvdvvlehggcvtvmaqdkptvdielvtttvsnmaevrsyc
yeasisdmasdsrcptqgeayldkqsdtqyvckrtlvdrgwgngcglfgkgslvtcakfa
cskkmtgksiqpenleyrimlsvhgsqhsgmivndtghetdenrakveitpnspraeatl
ggfgslgldceprtgldfsdlyyltmnnkhwlvhkewfhdiplpwhagadtgtphwnnke
alvefkdahakrqtvvvlgsqegavhtalagaleaemdgakgrlssghlkcrlkmdklrl
kgv

Sequence, based on observed residues (ATOM records):

>d5gzob1 f.10.1.0 (B:1-303) automated matches {Zika virus [TaxId: 64320]}
ircigvsnrdfvegmsggtwvdvvlehggcvtvmaqdkptvdielvtttvsnmaevrsyc
yeasisdmasdsrcptqgeayldkqsdtqyvckrtlvdrgwgngcglfgkgslvtcakfa
cskkmtgksiqpenleyrimlsvhgsenrakveitpnspraeatlggfgslgldceprtg
ldfsdlyyltmnnkhwlvhkewfhdiplpwhagadtgtphwnnkealvefkdahakrqtv
vvlgsqegavhtalagaleaemdgakgrlssghlkcrlkmdklrlkgv

Timeline for d5gzob1:

• d5gzob1 first appeared in SCOPe 2.06
  
• d5gzob1 appears in SCOPe 2.07