Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2782725Fold b.34: SH3-like barrel [50036] (21 superfamilies)
    barrel, partly opened; n*=4, S*=8; meander
    the last strand is interrupted by a turn of 3-10 helix
  4. 2784275Superfamily b.34.6: Cell growth inhibitor/plasmid maintenance toxic component [50118] (4 families) (S)
    contains insert beta-sheet subdomain and C-terminal helix
  5. 2784382Family b.34.6.0: automated matches [328522] (1 protein)
    not a true family
  6. 2784383Protein automated matches [328523] (5 species)
    not a true protein

Species:

  1. 2784384Bacillus cereus [TaxId:1396] [403149] (1 PDB entry)
  2. 2784386Deinococcus radiodurans [TaxId:1299] [398722] (5 PDB entries)
    1. Domains for 7d28:
      1. 2784387Domain d7d28a_: 7d28 A: [398757]
        automated match to d5ck9a_
        complexed with gol, mes
      2. 2784388Domain d7d28b_: 7d28 B: [398732]
        automated match to d5ck9a_
        complexed with gol, mes
      3. 2784389Domain d7d28c_: 7d28 C: [398740]
        automated match to d5ck9a_
        complexed with gol, mes
      4. 2784390Domain d7d28d_: 7d28 D: [398734]
        automated match to d5ck9a_
        complexed with gol, mes
    2. Domains for 7d2m:
      1. 2784395Domain d7d2mb_: 7d2m B: [398723]
        automated match to d5ck9a_
        complexed with 3po, so4
      2. 2784396Domain d7d2mc_: 7d2m C: [398761]
        automated match to d5ck9a_
        complexed with 3po, so4
    3. Domains for 7d2n:
      1. 2784391Domain d7d2na_: 7d2n A: [398794]
        automated match to d5ck9a_
      2. 2784392Domain d7d2nb_: 7d2n B: [398765]
        automated match to d5ck9a_
      3. 2784393Domain d7d2nc_: 7d2n C: [398759]
        automated match to d5ck9a_
      4. 2784394Domain d7d2nd_: 7d2n D: [398760]
        automated match to d5ck9a_
    4. Domains for 7d2p:
      1. 2784401Domain d7d2pa_: 7d2p A: [398736]
        automated match to d5ck9a_
      2. 2784402Domain d7d2pb_: 7d2p B: [398756]
        automated match to d5ck9a_
      3. 2784403Domain d7d2pc_: 7d2p C: [398863]
        automated match to d5ck9a_
      4. 2784404Domain d7d2pd_: 7d2p D: [398739]
        automated match to d5ck9a_
    5. Domains for 7d2q:
      1. 2784397Domain d7d2qa_: 7d2q A: [398778]
        automated match to d5ck9a_
      2. 2784398Domain d7d2qc_: 7d2q C: [398781]
        automated match to d5ck9a_
      3. 2784399Domain d7d2qe_: 7d2q E: [398771]
        automated match to d5ck9a_
      4. 2784400Domain d7d2qg_: 7d2q G: [398770]
        automated match to d5ck9a_
  3. 2784405Klebsiella pneumoniae [TaxId:272620] [403022] (1 PDB entry)
  4. 2784410Mycobacterium tuberculosis [TaxId:1773] [390715] (1 PDB entry)
  5. 2784412Mycobacterium tuberculosis [TaxId:83332] [328524] (7 PDB entries)
    1. Domains for 5hjz:
      1. 2784427Domain d5hjza_: 5hjz A: [328790]
        Other proteins in same PDB: d5hjzb2
        automated match to d4of1a_
        protein/RNA complex
      2. 2784428Domain d5hjzb1: 5hjz B:1-116 [328797]
        Other proteins in same PDB: d5hjzb2
        automated match to d4of1a_
        protein/RNA complex
    2. Domains for 5hk0:
      1. 2784429Domain d5hk0a_: 5hk0 A: [328563]
        automated match to d4of1a_
        protein/RNA complex
      2. 2784430Domain d5hk0b_: 5hk0 B: [328525]
        automated match to d4of1a_
        protein/RNA complex
      3. 2784431Domain d5hk0c_: 5hk0 C: [328537]
        automated match to d4of1a_
        protein/RNA complex
      4. 2784432Domain d5hk0d_: 5hk0 D: [328546]
        automated match to d4of1a_
        protein/RNA complex
    3. Domains for 5hk3:
      1. 2784413Domain d5hk3a_: 5hk3 A: [328600]
        automated match to d4of1a_
        protein/DNA complex; mutant
      2. 2784414Domain d5hk3b_: 5hk3 B: [328766]
        automated match to d4of1a_
        protein/DNA complex; mutant
    4. Domains for 6kys:
      1. 2784424Domain d6kysa1: 6kys A:2-118 [390769]
        Other proteins in same PDB: d6kysa2, d6kysb2
        automated match to d5hk0a_
      2. 2784425Domain d6kysb1: 6kys B:2-118 [390791]
        Other proteins in same PDB: d6kysa2, d6kysb2
        automated match to d5hk0a_
    5. Domains for 6kyt:
      1. 2784416Domain d6kyta_: 6kyt A: [390754]
        Other proteins in same PDB: d6kytb2, d6kytd2, d6kytg2, d6kyth2, d6kytj2, d6kytk2
        automated match to d5hk0a_
        protein/RNA complex
      2. 2784417Domain d6kytb1: 6kyt B:1-118 [390744]
        Other proteins in same PDB: d6kytb2, d6kytd2, d6kytg2, d6kyth2, d6kytj2, d6kytk2
        automated match to d5hk0a_
        protein/RNA complex
      3. 2784418Domain d6kytd1: 6kyt D:1-118 [390806]
        Other proteins in same PDB: d6kytb2, d6kytd2, d6kytg2, d6kyth2, d6kytj2, d6kytk2
        automated match to d5hk0a_
        protein/RNA complex
      4. 2784419Domain d6kyte_: 6kyt E: [390767]
        Other proteins in same PDB: d6kytb2, d6kytd2, d6kytg2, d6kyth2, d6kytj2, d6kytk2
        automated match to d5hk0a_
        protein/RNA complex
      5. 2784420Domain d6kytg1: 6kyt G:1-118 [390811]
        Other proteins in same PDB: d6kytb2, d6kytd2, d6kytg2, d6kyth2, d6kytj2, d6kytk2
        automated match to d5hk0a_
        protein/RNA complex
      6. 2784421Domain d6kyth1: 6kyt H:1-118 [390818]
        Other proteins in same PDB: d6kytb2, d6kytd2, d6kytg2, d6kyth2, d6kytj2, d6kytk2
        automated match to d5hk0a_
        protein/RNA complex
      7. 2784422Domain d6kytj1: 6kyt J:1-118 [390773]
        Other proteins in same PDB: d6kytb2, d6kytd2, d6kytg2, d6kyth2, d6kytj2, d6kytk2
        automated match to d5hk0a_
        protein/RNA complex
      8. 2784423Domain d6kytk1: 6kyt K:1-118 [390659]
        Other proteins in same PDB: d6kytb2, d6kytd2, d6kytg2, d6kyth2, d6kytj2, d6kytk2
        automated match to d5hk0a_
        protein/RNA complex
    6. Domain for 6l29:
    7. Domain for 6l2a:

More info for Protein automated matches from b.34.6.0: automated matches

Timeline for Protein automated matches from b.34.6.0: automated matches: