SCOPe 2.06: Species: Danio rerio [TaxId: 7955]

Lineage for Species: Danio rerio [TaxId: 7955]

Root: SCOPe 2.06
Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
Fold d.96: T-fold [55619] (2 superfamilies)
beta(2)-alpha(2)-beta(2); 2 layers: alpha/beta; antiparallel sheet 1234
tunnel-shaped: its known members form wide oligomeric barrels different sizes
Superfamily d.96.1: Tetrahydrobiopterin biosynthesis enzymes-like [55620] (5 families)
bind purine or pterin in topologically similar sites between subunits
Family d.96.1.0: automated matches [227243] (1 protein)
not a true family
Protein automated matches [227009] (13 species)
not a true protein
Species Danio rerio [TaxId:7955] [327451] (2 PDB entries)

PDB entries in Species: Danio rerio [TaxId: 7955]:

Domain(s) for 5ll1:
1. Domain d5ll1a1: 5ll1 A:8-142 [328959]
  automated match to d4n9sa1
2. Domain d5ll1a2: 5ll1 A:143-294 [328960]
  automated match to d4n9sa2
3. Domain d5ll1b1: 5ll1 B:8-142 [329058]
  automated match to d4n9sa1
4. Domain d5ll1b2: 5ll1 B:143-294 [329059]
  automated match to d4n9sa2
5. Domain d5ll1c1: 5ll1 C:8-142 [328955]
  automated match to d4n9sa1
6. Domain d5ll1c2: 5ll1 C:143-294 [328956]
  automated match to d4n9sa2
7. Domain d5ll1d1: 5ll1 D:8-142 [329088]
  automated match to d4n9sa1
8. Domain d5ll1d2: 5ll1 D:143-294 [329089]
  automated match to d4n9sa2
9. Domain d5ll1e1: 5ll1 E:8-142 [329163]
  automated match to d4n9sa1
10. Domain d5ll1e2: 5ll1 E:143-294 [329164]
  automated match to d4n9sa2
11. Domain d5ll1f1: 5ll1 F:8-142 [328992]
  automated match to d4n9sa1
12. Domain d5ll1f2: 5ll1 F:143-294 [328993]
  automated match to d4n9sa2
13. Domain d5ll1g1: 5ll1 G:8-142 [329007]
  automated match to d4n9sa1
14. Domain d5ll1g2: 5ll1 G:143-294 [329008]
  automated match to d4n9sa2
15. Domain d5ll1h1: 5ll1 H:8-142 [329010]
  automated match to d4n9sa1
16. Domain d5ll1h2: 5ll1 H:143-294 [329011]
  automated match to d4n9sa2
Domain(s) for 5m98:
1. Domain d5m98a1: 5m98 A:8-142 [327452]
  automated match to d4n9sa1
2. Domain d5m98a2: 5m98 A:143-294 [327453]
  automated match to d4n9sa2
3. Domain d5m98b1: 5m98 B:8-142 [327510]
  automated match to d4n9sa1
4. Domain d5m98b2: 5m98 B:143-294 [327511]
  automated match to d4n9sa2
5. Domain d5m98c1: 5m98 C:8-142 [327455]
  automated match to d4n9sa1
6. Domain d5m98c2: 5m98 C:143-294 [327456]
  automated match to d4n9sa2
7. Domain d5m98d1: 5m98 D:8-142 [327474]
  automated match to d4n9sa1
8. Domain d5m98d2: 5m98 D:143-294 [327475]
  automated match to d4n9sa2
9. Domain d5m98e1: 5m98 E:8-142 [327508]
  automated match to d4n9sa1
10. Domain d5m98e2: 5m98 E:143-294 [327509]
  automated match to d4n9sa2
11. Domain d5m98f1: 5m98 F:8-142 [327542]
  automated match to d4n9sa1
12. Domain d5m98f2: 5m98 F:143-294 [327543]
  automated match to d4n9sa2
13. Domain d5m98g1: 5m98 G:8-142 [327520]
  automated match to d4n9sa1
14. Domain d5m98g2: 5m98 G:143-294 [327521]
  automated match to d4n9sa2
15. Domain d5m98h1: 5m98 H:8-142 [327458]
  automated match to d4n9sa1
16. Domain d5m98h2: 5m98 H:143-294 [327459]
  automated match to d4n9sa2

More info for Species Danio rerio [TaxId:7955] from d.96.1.0 automated matches

Timeline for Species Danio rerio [TaxId:7955] from d.96.1.0 automated matches:

Species Danio rerio [TaxId:7955] from d.96.1.0 automated matches is new in SCOPe 2.06-stable
Species Danio rerio [TaxId:7955] from d.96.1.0 automated matches is called Species Zebrafish (Danio rerio) [TaxId:7955] from d.96.1.0 automated matches in SCOPe 2.07
Species Danio rerio [TaxId:7955] from d.96.1.0 automated matches appears in the current release, SCOPe 2.08, called Species Zebrafish (Danio rerio) [TaxId:7955] from d.96.1.0 automated matches