SCOPe 2.08: Domain d5merd1: 5mer D:1-181

Lineage for d5merd1 (5mer D:1-181)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.19: MHC antigen-recognition domain [54451] (1 superfamily)
   dimeric

4. Superfamily d.19.1: MHC antigen-recognition domain [54452] (2 families)

5. Family d.19.1.1: MHC antigen-recognition domain [54453] (13 proteins)

6. Protein Class I MHC, alpha-1 and alpha-2 domains [54468] (29 species)

7. Species Human (Homo sapiens), HLA-A2.1 [TaxId:9606] [54470] (104 PDB entries)
   Uniprot P01892 25-298

8. Domain d5merd1: 5mer D:1-181 [327076]
   Other proteins in same PDB: d5mera2, d5merb1, d5merb2, d5merd2, d5mere1, d5mere2
   automated match to d1ogaa2
   complexed with ca, edo, gol, mes, so4

Details for d5merd1

PDB Entry: 5mer, 1.88 Å

PDB Description: human leukocyte antigen a02 presenting ilakflhel

PDB Compounds: (D:) HLA class I histocompatibility antigen, A-2 alpha chain

SCOPe Domain Sequences for d5merd1:

Sequence; same for both SEQRES and ATOM records:

>d5merd1 d.19.1.1 (D:1-181) Class I MHC, alpha-1 and alpha-2 domains {Human (Homo sapiens), HLA-A2.1 [TaxId: 9606]}
gshsmryfftsvsrpgrgeprfiavgyvddtqfvrfdsdaasqrmeprapwieqegpeyw
dgetrkvkahsqthrvdlgtlrgyynqseagshtvqrmygcdvgsdwrflrgyhqyaydg
kdyialkedlrswtaadmaaqttkhkweaahvaeqlraylegtcvewlrrylengketlq
r

Timeline for d5merd1:

• d5merd1 first appeared in SCOPe 2.06
  
• d5merd1 appears in SCOPe 2.07