SCOPe 2.07: Domain d5gjsb_: 5gjs B:

Lineage for d5gjsb_ (5gjs B:)

1. Root: SCOPe 2.07

2. Class h: Coiled coil proteins [57942] (7 folds)

3. Fold h.3: Stalk segment of viral fusion proteins [58063] (3 superfamilies)
   core: trimeric coiled coil

4. Superfamily h.3.1: Influenza hemagglutinin (stalk) [58064] (2 families)

5. Family h.3.1.0: automated matches [254278] (1 protein)
   not a true family

6. Protein automated matches [254645] (42 species)
   not a true protein

7. Species Influenza A virus (a/chicken/guangdong/s1311/2010(h6n6)) [TaxId:1454272] [275804] (6 PDB entries)

8. Domain d5gjsb_: 5gjs B: [326958]
   Other proteins in same PDB: d5gjsa1, d5gjsa2, d5gjsl1, d5gjsl2
   automated match to d5bnyf_
   complexed with nag

Details for d5gjsb_

PDB Entry: 5gjs, 2.9 Å

PDB Description: crystal structure of h1 hemagglutinin from a/california/04/2009 in complex with a neutralizing antibody 3e1

PDB Compounds: (B:) Hemagglutinin

SCOPe Domain Sequences for d5gjsb_:

Sequence, based on SEQRES records:

>d5gjsb_ h.3.1.0 (B:) automated matches {Influenza A virus (a/chicken/guangdong/s1311/2010(h6n6)) [TaxId: 1454272]}
gaiagfieggwtgmvdgwygyhhqneqgsgyaadlkstqnaideitnkvnsviekmntqf
tavgkefnhlekrienlnkkvddgfldiwtynaellvllenertldyhdsnvknlyekvr
sqlknnakeigngcfefyhkcdntcmesvkngtydypkyseeaklnre

Sequence, based on observed residues (ATOM records):

>d5gjsb_ h.3.1.0 (B:) automated matches {Influenza A virus (a/chicken/guangdong/s1311/2010(h6n6)) [TaxId: 1454272]}
gaiafieggwtgmvdgwygyhhqneqgsgyaadlkstqnaideitnkvnsviekmntqft
avgkefnhlekrienlnkkvddgfldiwtynaellvllenertldyhdsnvknlyekvrs
qlknnakeigngcfefyhkcdntcmesvkngtydypkyseeaklnre

Timeline for d5gjsb_:

• d5gjsb_ first appeared in SCOPe 2.06
  
• d5gjsb_ appears in the current release, SCOPe 2.08