SCOPe 2.07: Domain d5l5xr_: 5l5x R:

Lineage for d5l5xr_ (5l5x R:)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
   4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing

4. Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families)
   N-terminal residue provides two catalytic groups, nucleophile and proton donor

5. Family d.153.1.0: automated matches [191393] (1 protein)
   not a true family

6. Protein automated matches [190509] (19 species)
   not a true protein

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [256123] (110 PDB entries)

8. Domain d5l5xr_: 5l5x R: [325020]
   Other proteins in same PDB: d5l5xa_, d5l5xb_, d5l5xf_, d5l5xg_, d5l5xh_, d5l5xi_, d5l5xj_, d5l5xk_, d5l5xl_, d5l5xm_, d5l5xn_, d5l5xo_, d5l5xp_, d5l5xt_, d5l5xu_, d5l5xv_, d5l5xw_, d5l5xx_, d5l5xy_, d5l5xz_
   automated match to d1iruf_
   complexed with 04c, cl, mes, mg

Details for d5l5xr_

PDB Entry: 5l5x, 2.9 Å

PDB Description: yeast 20s proteasome with human beta5c (1-138) and human beta6 (97- 111; 118-133) in complex with onx 0914

PDB Compounds: (R:) Proteasome subunit alpha type-5

SCOPe Domain Sequences for d5l5xr_:

Sequence, based on SEQRES records:

>d5l5xr_ d.153.1.0 (R:) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
drgvstfspegrlfqveysleaiklgstaigiatkegvvlgvekratspllesdsiekiv
eidrhigcamsgltadarsmiehartaavthnlyydedinvesltqsvcdlalrfgegas
geerlmsrpfgvalliaghdaddgyqlfhaepsgtfyrynakaigsgsegaqaellnewh
ssltlkeaellvlkilkqvmeekldennaqlscitkqdgfkiydnektaelikelkekea
ae

Sequence, based on observed residues (ATOM records):

>d5l5xr_ d.153.1.0 (R:) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
drgvstfspegrlfqveysleaiklgstaigiatkegvvlgvekratspllesdsiekiv
eidrhigcamsgltadarsmiehartaavthnlyydedinvesltqsvcdlalrfgelms
rpfgvalliaghdaddgyqlfhaepsgtfyrynakaigsgsegaqaellnewhssltlke
aellvlkilkqvmeekldennaqlscitkqdgfkiydnektaelikelkekeaae

Timeline for d5l5xr_:

• d5l5xr_ first appeared in SCOPe 2.06
  
• d5l5xr_ appears in the current release, SCOPe 2.08