Lineage for d5k8ta1 (5k8t A:173-481)

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2446887Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 2446888Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families) (S)
    division into families based on beta-sheet topologies
  5. 2450935Family c.37.1.14: RNA helicase [52724] (4 proteins)
    duplication: consists of two similar domains, one binds NTP and the other binds RNA; also contains an all-alpha subdomain in the C-terminal extension
  6. 2451014Protein automated matches [226986] (8 species)
    not a true protein
  7. 2451048Species Zika virus [TaxId:64320] [317808] (28 PDB entries)
  8. 2451056Domain d5k8ta1: 5k8t A:173-481 [324969]
    Other proteins in same PDB: d5k8ta2
    automated match to d2bhra2
    complexed with cl, gsp, mg

Details for d5k8ta1

PDB Entry: 5k8t (more details), 1.85 Å

PDB Description: crystal structure of zikv ns3 helicase in complex with gtp-gammar s and an magnesium ion
PDB Compounds: (A:) ZIKV NS3 helicase

SCOPe Domain Sequences for d5k8ta1:

Sequence, based on SEQRES records: (download)

>d5k8ta1 c.37.1.14 (A:173-481) automated matches {Zika virus [TaxId: 64320]}
etpvecfepsmlkkkqltvldlhpgagktrrvlpeivreaiktrlrtvilaptrvvaaem
eealrglpvrymttavnvthsgteivdlmchatftsrllqpirvpnynlyimdeahftdp
ssiaargyistrvemgeaaaifmtatppgtrdafpdsnspimdtevevperawssgfdwv
tdhsgktvwfvpsvrngneiaacltkagkrviqlsrktfetefqktkhqewdfvvttdis
emganfkadrvidsrrclkpvildgervilagpmpvthasaaqrrgrigrnpnkpgdeyl
ygggcaetd

Sequence, based on observed residues (ATOM records): (download)

>d5k8ta1 c.37.1.14 (A:173-481) automated matches {Zika virus [TaxId: 64320]}
etpvecfepsmlkkkqltvldlhpgagktrrvlpeivreaiktrlrtvilaptrvvaaem
eealrglpvrymivdlmchatftsrllqpirvpnynlyimdeahftdpssiaargyistr
vemgeaaaifmtatppgtrdafpdsnspimdtevevperawssgfdwvtdhsgktvwfvp
svrngneiaacltkagkrviqlsrktfetefqktkhqewdfvvttdisemganfkadrvi
dsrrclkpvildgervilagpmpvthasaaqrrgrigrnpnkpgdeylygggcaetd

SCOPe Domain Coordinates for d5k8ta1:

Click to download the PDB-style file with coordinates for d5k8ta1.
(The format of our PDB-style files is described here.)

Timeline for d5k8ta1:

View in 3D
Domains from same chain:
(mouse over for more information)
d5k8ta2