SCOPe 2.07: Domain d5kndg_: 5knd G:

Lineage for d5kndg_ (5knd G:)

1. Root: SCOPe 2.07

2. Class h: Coiled coil proteins [57942] (7 folds)

3. Fold h.4: Antiparallel coiled-coil [58086] (19 superfamilies)
   this is not a true fold; contains at least two very long antiparallel helices

4. Superfamily h.4.20: V-type ATPase central rotor subunit D [310580] (2 families)
   Role similar to F1 ATP synthase gamma (c.49.2), but do not appear to be homologous
   Has 2 antiparallel beta strands in addition to coiled coils; see PubMed 25971514

5. Family h.4.20.0: automated matches [310670] (1 protein)
   not a true family

6. Protein automated matches [310867] (3 species)
   not a true protein

7. Species Enterococcus hirae [TaxId:768486] [324701] (2 PDB entries)

8. Domain d5kndg_: 5knd G: [324702]
   Other proteins in same PDB: d5kndd1, d5kndd2, d5kndd3, d5knde1, d5knde2, d5knde3, d5kndf1, d5kndf2, d5kndf3
   automated match to d3a5cg_
   complexed with b3p, gol, mg, po4

Details for d5kndg_

PDB Entry: 5knd, 2.89 Å

PDB Description: crystal structure of the pi-bound v1 complex

PDB Compounds: (G:) V-type sodium ATPase subunit D

SCOPe Domain Sequences for d5kndg_:

Sequence, based on SEQRES records:

>d5kndg_ h.4.20.0 (G:) automated matches {Enterococcus hirae [TaxId: 768486]}
nptrmeltrlkkqlttatrghkllkdkqdelmrqfillirknnelrqaieketqtamkdf
vlakstveeafidellalpaenvsisvveknimsvkvplmnfqydetlnetpleygylhs
naeldrsidgftqllpkllklaevektcqlmaeeiektrrrvnaleymtipqleetiyyi
kmkleeneraevtrlikvknm

Sequence, based on observed residues (ATOM records):

>d5kndg_ h.4.20.0 (G:) automated matches {Enterococcus hirae [TaxId: 768486]}
nptrmeltrlkkqlttatrghkllkdkqdelmrqfillirknnelrqaieketqtamkdf
vlakstveeafideenvsisvveknimsvkvplmnfqnaeldrsidgftqllpkllklae
vektcqlmaeeiektrrrvnaleymtipqleetiyyikmkleeneraevtrlikvknm

Timeline for d5kndg_:

• d5kndg_ first appeared in SCOPe 2.06
  
• d5kndg_ appears in the current release, SCOPe 2.08