Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2634415Class g: Small proteins [56992] (98 folds)
  3. 2643668Fold g.96: Flavivirus non-structural protein NS2B-like [310561] (1 superfamily)
  4. 2643669Superfamily g.96.1: Flavivirus non-structural protein NS2B-like [310588] (2 families) (S)
    Pfam PF01002; see PubMed 16532006 for discussion of NS2B-NS3pro complex
  5. 2643682Family g.96.1.0: automated matches [324385] (1 protein)
    not a true family
  6. 2643683Protein automated matches [324386] (3 species)
    not a true protein

Species:

  1. 2643684Yellow fever virus [TaxId:11089] [379377] (1 PDB entry)
  2. 2643689Zika virus (strain mr 766) [TaxId:64320] [324387] (1 PDB entry)
  3. 2643694Zika virus [TaxId:64320] [327137] (14 PDB entries)
    1. Domains for 5gpi:
      1. 2643697Domain d5gpia_: 5gpi A: [327153]
        Other proteins in same PDB: d5gpib_, d5gpid_, d5gpif_, d5gpih_
        automated match to d2ggva_
      2. 2643698Domain d5gpic_: 5gpi C: [327138]
        Other proteins in same PDB: d5gpib_, d5gpid_, d5gpif_, d5gpih_
        automated match to d2ggva_
      3. 2643699Domain d5gpie_: 5gpi E: [327151]
        Other proteins in same PDB: d5gpib_, d5gpid_, d5gpif_, d5gpih_
        automated match to d2ggva_
      4. 2643700Domain d5gpig_: 5gpi G: [327152]
        Other proteins in same PDB: d5gpib_, d5gpid_, d5gpif_, d5gpih_
        automated match to d2ggva_
    2. Domain for 5h4i:
    3. Domain for 5h6v:
    4. Domains for 5yod:
      1. 2643707Domain d5yoda_: 5yod A: [348860]
        Other proteins in same PDB: d5yodb_, d5yodd_, d5yodf_, d5yodh_
        automated match to d2ggva_
        complexed with bez
      2. 2643708Domain d5yodc_: 5yod C: [348911]
        Other proteins in same PDB: d5yodb_, d5yodd_, d5yodf_, d5yodh_
        automated match to d2ggva_
        complexed with bez
      3. 2643709Domain d5yode_: 5yod E: [348927]
        Other proteins in same PDB: d5yodb_, d5yodd_, d5yodf_, d5yodh_
        automated match to d2ggva_
        complexed with bez
      4. 2643710Domain d5yodg_: 5yod G: [348870]
        Other proteins in same PDB: d5yodb_, d5yodd_, d5yodf_, d5yodh_
        automated match to d2ggva_
        complexed with bez
    5. Domain for 5yof:
    6. Domain for 6kk2:
    7. Domain for 6kk3:
    8. Domain for 6kk4:
    9. Domain for 6kk5:
    10. Domain for 6kk6:
    11. Domain for 6kpq:
    12. Domains for 6l4z:
      1. 2643703Domain d6l4za_: 6l4z A: [389251]
        Other proteins in same PDB: d6l4zb_, d6l4zd_, d6l4zf_, d6l4zh_
        automated match to d5gj4a1
        complexed with e5x
      2. 2643704Domain d6l4zc_: 6l4z C: [389248]
        Other proteins in same PDB: d6l4zb_, d6l4zd_, d6l4zf_, d6l4zh_
        automated match to d5gj4a1
        complexed with e5x
      3. 2643705Domain d6l4ze_: 6l4z E: [389237]
        Other proteins in same PDB: d6l4zb_, d6l4zd_, d6l4zf_, d6l4zh_
        automated match to d5gj4a1
        complexed with e5x
      4. 2643706Domain d6l4zg_: 6l4z G: [389241]
        Other proteins in same PDB: d6l4zb_, d6l4zd_, d6l4zf_, d6l4zh_
        automated match to d5gpig_
        complexed with e5x
    13. Domains for 6l50:
      1. 2643711Domain d6l50a_: 6l50 A: [389261]
        Other proteins in same PDB: d6l50b_, d6l50d_, d6l50f_, d6l50h_
        automated match to d2ggva_
        complexed with e60
      2. 2643712Domain d6l50c_: 6l50 C: [389258]
        Other proteins in same PDB: d6l50b_, d6l50d_, d6l50f_, d6l50h_
        automated match to d2ggva_
        complexed with e60
      3. 2643713Domain d6l50e_: 6l50 E: [389247]
        Other proteins in same PDB: d6l50b_, d6l50d_, d6l50f_, d6l50h_
        automated match to d2ggva_
        complexed with e60
      4. 2643714Domain d6l50g_: 6l50 G: [389239]
        Other proteins in same PDB: d6l50b_, d6l50d_, d6l50f_, d6l50h_
        automated match to d2ggva_
        complexed with e60
    14. Domain for 6y3b:

More info for Protein automated matches from g.96.1.0: automated matches

Timeline for Protein automated matches from g.96.1.0: automated matches: