Lineage for d5gvsc_ (5gvs C:)

  1. Root: SCOPe 2.06
  2. 2089713Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2123292Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 2123293Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families) (S)
    division into families based on beta-sheet topologies
  5. 2128217Family c.37.1.0: automated matches [191323] (1 protein)
    not a true family
  6. 2128218Protein automated matches [190123] (130 species)
    not a true protein
  7. 2128604Species Human (Homo sapiens) [TaxId:9606] [186862] (124 PDB entries)
  8. 2128771Domain d5gvsc_: 5gvs C: [324232]
    automated match to d2g9nb_

Details for d5gvsc_

PDB Entry: 5gvs (more details), 2.2 Å

PDB Description: crystal structure of the ddx41 dead domain in an apo open form
PDB Compounds: (C:) Probable ATP-dependent RNA helicase DDX41

SCOPe Domain Sequences for d5gvsc_:

Sequence, based on SEQRES records: (download)

>d5gvsc_ c.37.1.0 (C:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
ailrglkkkgihhptpiqiqgiptilsgrdmigiaftgsgktlvftlpvimfcleqekrl
pfskregpygliicpsrelarqthgileyycrllqedsspllrcalciggmsvkeqmeti
rhgvhmmvatpgrlmdllqkkmvsldicrylaldeadrmidmgfegdirtifsyfkgqrq
tllfsatmpkkiqnfaksalvkpvtinvg

Sequence, based on observed residues (ATOM records): (download)

>d5gvsc_ c.37.1.0 (C:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
ailrglkkkgiptilsgrdmigiaftgsgktlvftlpvimfcleqekrlpfskregpygl
iicpsrelarqthgileyycrllqedsspllrcalciggmsvkeqmetirhgvhmmvatp
grlmdllqkkmvsldicrylaldeadrmidmgfegdirtifsyfkgqrqtllfsatmpkk
iqnfaksalvkpvtinvg

SCOPe Domain Coordinates for d5gvsc_:

Click to download the PDB-style file with coordinates for d5gvsc_.
(The format of our PDB-style files is described here.)

Timeline for d5gvsc_: