Lineage for d1qdea_ (1qde A:)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2109203Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 2109204Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families) (S)
    division into families based on beta-sheet topologies
  5. 2113231Family c.37.1.19: Tandem AAA-ATPase domain [81268] (24 protein domains)
    duplication: tandem repeat of two RecA-like (AAA) domains
  6. 2113298Protein Initiation factor 4a [52706] (2 species)
    homologous to UvrB
  7. 2113299Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [52707] (4 PDB entries)
  8. 2113301Domain d1qdea_: 1qde A: [32410]
    N-terminal AAA domain; P-loop is empty and in a non-canonical conformation
    complexed with so4

Details for d1qdea_

PDB Entry: 1qde (more details), 2 Å

PDB Description: crystal structure of the atpase domain of translation initiation factor 4a from saccharomyces cerevisiae-the prototype of the dead box protein family
PDB Compounds: (A:) translation initiation factor 4a

SCOPe Domain Sequences for d1qdea_:

Sequence, based on SEQRES records: (download)

>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
iqtnydkvvykfddmeldenllrgvfgygfeepsaiqqraimpiieghdvlaqaqsgtgk
tgtfsiaalqridtsvkapqalmlaptrelalqiqkvvmalafhmdikvhaciggtsfve
daeglrdaqivvgtpgrvfdniqrrrfrtdkikmfildeademlssgfkeqiyqiftllp
pttqvvllsatmpndvlevttkfmrnpvrilv

Sequence, based on observed residues (ATOM records): (download)

>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
iqtnydkvvykfddmeldenllrgvfgygfeepsaiqqraimpiieghdvlaqaqsgtgk
tgtfsiaalqridtsvkapqalmlaptrelalqiqkvvmalafhmdikvhacigglrdaq
ivvgtpgrvfdniqrrrfrtdkikmfildeademlssgfkeqiyqiftllppttqvvlls
atmpndvlevttkfmrnpvrilv

SCOPe Domain Coordinates for d1qdea_:

Click to download the PDB-style file with coordinates for d1qdea_.
(The format of our PDB-style files is described here.)

Timeline for d1qdea_: