SCOPe 2.08: Domain d1uaab1: 1uaa B:2-307

Lineage for d1uaab1 (1uaa B:2-307)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (27 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.19: Tandem AAA-ATPase domain [81268] (41 proteins)
   duplication: tandem repeat of two RecA-like (AAA) domains

6. Protein DEXX box DNA helicase [52701] (2 species)
   each AAA domain contains an all-alpha insert subdomain

7. Species Escherichia coli, RepD [TaxId:562] [52703] (1 PDB entry)

8. Domain d1uaab1: 1uaa B:2-307 [32403]
   protein/DNA complex
   has additional subdomain(s) that are not in the common domain

Details for d1uaab1

PDB Entry: 1uaa, 3 Å

PDB Description: e. coli rep helicase/dna complex

PDB Compounds: (B:) protein (ATP-dependent DNA helicase rep.)

SCOPe Domain Sequences for d1uaab1:

Sequence; same for both SEQRES and ATOM records:

>d1uaab1 c.37.1.19 (B:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
rlnpgqqqavefvtgpclvlagagsgktrvitnkiahlirgcgyqarhiaavtftnkaar
emkervgqtlgrkearglmistfhtlgldiikreyaalgmkanfslfddtdqlallkelt
eglieddkvllqqlistisnwkndlktpsqaaasaigerdrifahcyglydahlkacnvl
dfddlillptlllqaneevrkrwqnkiryllvdeyqdtntsqyelvkllvgsrarftvvg
dddqsiyswrgarpqnlvllsqdfpalkvikleqnyrssgrilkaaniliannphvfekr
lfselg

Timeline for d1uaab1:

• d1uaab1 first appeared (with stable ids) in SCOP 1.55
  
• d1uaab1 appears in SCOPe 2.07