SCOPe 2.08: Domain d1c9kc_: 1c9k C:

Lineage for d1c9kc_ (1c9k C:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (27 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.11: RecA protein-like (ATPase-domain) [52670] (22 proteins)
   core: mixed beta-sheet of 8 strands, order 32451678; strand 7 is antiparallel to the rest

6. Protein Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU [52682] (1 species)
   lacks the last strand 8

7. Species Salmonella typhimurium [TaxId:90371] [52683] (2 PDB entries)

8. Domain d1c9kc_: 1c9k C: [32365]
   complexed with 5gp, mg, po4, pop
   missing some secondary structures that made up less than one-third of the common domain

Details for d1c9kc_

PDB Entry: 1c9k, 2.2 Å

PDB Description: the three dimensional structure of adenosylcobinamide kinase/ adenosylcobinamide phosphate gualylyltransferase (cobu) complexed with gmp: evidence for a substrate induced transferase active site

PDB Compounds: (C:) adenosylcobinamide kinase

SCOPe Domain Sequences for d1c9kc_:

Sequence, based on SEQRES records:

>d1c9kc_ c.37.1.11 (C:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]}
milvtggarsgksrhaealigdapqvlyiatsqilddemaariqhhkdgrpahwrtaecw
rhldtlitadlapddaillecittmvtnllfalggendpeqwdyaameraiddeiqilia
acqrcpakvvlvtnevgmgivpenrlarhfrdiagrvnqrlaaaadevwlvvsgigvkik

Sequence, based on observed residues (ATOM records):

>d1c9kc_ c.37.1.11 (C:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]}
milvtggarsgksrhaealigdapqvlyiatsqilhhkdgrpahwrtarhldtlitadla
pddaillecittmvtnllfalgdpeqwdyaameraiddeiqiliaacqrcpakvvlvtne
vgmgivpenrlarhfrdiagrvnqrlaaaadevwlvvsgigvkik

Timeline for d1c9kc_:

• d1c9kc_ first appeared (with stable ids) in SCOP 1.55
  
• d1c9kc_ appears in SCOPe 2.07