Lineage for Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2826025Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2826663Superfamily c.1.2: Ribulose-phoshate binding barrel [51366] (7 families) (S)
  5. 2827466Family c.1.2.0: automated matches [191350] (1 protein)
    not a true family
  6. 2827467Protein automated matches [190292] (36 species)
    not a true protein
  7. 2827735Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [323630] (11 PDB entries)

PDB entries in Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]:

  1. Domain(s) for 5k2z:
    1. 2827748Domain d5k2za_: 5k2z A: [323696]
      automated match to d3fema_
      complexed with 6r3, cl, edo, so4
    2. 2827749Domain d5k2zb_: 5k2z B: [323631]
      automated match to d3fema_
      complexed with 6r3, cl, edo, so4
    3. 2827750Domain d5k2zc_: 5k2z C: [323633]
      automated match to d3fema_
      complexed with 6r3, cl, edo, so4
    4. 2827751Domain d5k2zd_: 5k2z D: [323721]
      automated match to d3fema_
      complexed with 6r3, cl, edo, so4
  2. Domain(s) for 5k3v:
    1. 2827752Domain d5k3va_: 5k3v A: [323632]
      automated match to d3fema_
      complexed with cl, edo, so4
    2. 2827753Domain d5k3vb_: 5k3v B: [323634]
      automated match to d3fema_
      complexed with cl, edo, so4
    3. 2827754Domain d5k3vc_: 5k3v C: [323644]
      automated match to d3fema_
      complexed with cl, edo, so4
    4. 2827755Domain d5k3vd_: 5k3v D: [323703]
      automated match to d3fema_
      complexed with cl, edo, so4
  3. Domain(s) for 5lnr:
    1. 2827736Domain d5lnra_: 5lnr A: [328647]
      automated match to d3fema_
      complexed with gol, plp
    2. 2827737Domain d5lnrb_: 5lnr B: [328650]
      automated match to d3fema_
      complexed with gol, plp
    3. 2827738Domain d5lnrc_: 5lnr C: [328629]
      automated match to d3fema_
      complexed with gol, plp
    4. 2827739Domain d5lnrd_: 5lnr D: [328699]
      automated match to d3fema_
      complexed with gol, plp
  4. Domain(s) for 5lns:
    1. 2827756Domain d5lnsa_: 5lns A: [328592]
      automated match to d3fema_
      complexed with 5rp, po4
    2. 2827757Domain d5lnsb_: 5lns B: [328581]
      automated match to d3fema_
      complexed with 5rp, po4
    3. 2827758Domain d5lnsc_: 5lns C: [328675]
      automated match to d3fema_
      complexed with 5rp, po4
    4. 2827759Domain d5lnsd_: 5lns D: [328572]
      automated match to d3fema_
      complexed with 5rp, po4
  5. Domain(s) for 5lnt:
    1. 2827780Domain d5lnta_: 5lnt A: [328663]
      automated match to d3fema_
      complexed with kpr, po4
    2. 2827781Domain d5lntb_: 5lnt B: [328607]
      automated match to d3fema_
      complexed with kpr, po4
    3. 2827782Domain d5lntc_: 5lnt C: [328643]
      automated match to d3fema_
      complexed with kpr, po4
    4. 2827783Domain d5lntd_: 5lnt D: [328587]
      automated match to d3fema_
      complexed with kpr, po4
  6. Domain(s) for 5lnu:
    1. 2827744Domain d5lnua_: 5lnu A: [328627]
      automated match to d3fema_
      complexed with kik, po4, so4
    2. 2827745Domain d5lnub_: 5lnu B: [328686]
      automated match to d3fema_
      complexed with kik, po4, so4
    3. 2827746Domain d5lnuc_: 5lnu C: [328665]
      automated match to d3fema_
      complexed with kik, po4, so4
    4. 2827747Domain d5lnud_: 5lnu D: [328604]
      automated match to d3fema_
      complexed with kik, po4, so4
  7. Domain(s) for 5lnv:
    1. 2827776Domain d5lnva_: 5lnv A: [328597]
      automated match to d3fema_
      complexed with kik, po4, so4
    2. 2827777Domain d5lnvb_: 5lnv B: [328594]
      automated match to d3fema_
      complexed with kik, po4, so4
    3. 2827778Domain d5lnvc_: 5lnv C: [328668]
      automated match to d3fema_
      complexed with kik, po4, so4
    4. 2827779Domain d5lnvd_: 5lnv D: [328628]
      automated match to d3fema_
      complexed with kik, po4, so4
  8. Domain(s) for 5lnw:
    1. 2827740Domain d5lnwa_: 5lnw A: [328687]
      automated match to d3fema_
      complexed with gol, hg3, k8p, rp5
    2. 2827741Domain d5lnwb_: 5lnw B: [328605]
      automated match to d3fema_
      complexed with gol, hg3, k8p, rp5
    3. 2827742Domain d5lnwc_: 5lnw C: [328590]
      automated match to d3fema_
      complexed with gol, hg3, k8p, rp5
    4. 2827743Domain d5lnwd_: 5lnw D: [328676]
      automated match to d3fema_
      complexed with gol, hg3, k8p, rp5
  9. Domain(s) for 6hx3:
    1. 2827768Domain d6hx3a_: 6hx3 A: [367786]
      automated match to d5lnub_
      complexed with so4
    2. 2827769Domain d6hx3b_: 6hx3 B: [367860]
      automated match to d5lnsb_
      complexed with so4
    3. 2827770Domain d6hx3c_: 6hx3 C: [367805]
      automated match to d5lnub_
      complexed with so4
    4. 2827771Domain d6hx3d_: 6hx3 D: [367819]
      automated match to d5lnsb_
      complexed with so4
    5. 2827772Domain d6hx3e_: 6hx3 E: [367811]
      automated match to d5lnub_
      complexed with so4
    6. 2827773Domain d6hx3f_: 6hx3 F: [367784]
      automated match to d5lnsb_
      complexed with so4
    7. 2827774Domain d6hx3g_: 6hx3 G: [367820]
      automated match to d5lnub_
      complexed with so4
    8. 2827775Domain d6hx3h_: 6hx3 H: [367840]
      automated match to d5lnsb_
      complexed with so4
  10. Domain(s) for 6hxg:
    1. 2827760Domain d6hxga_: 6hxg A: [367869]
      automated match to d5lnub_
      complexed with so4
    2. 2827761Domain d6hxgb_: 6hxg B: [367806]
      automated match to d5lnsd_
      complexed with so4
    3. 2827762Domain d6hxgc_: 6hxg C: [367787]
      automated match to d5lnub_
      complexed with so4
    4. 2827763Domain d6hxgd_: 6hxg D: [367788]
      automated match to d5lnsd_
      complexed with so4
    5. 2827764Domain d6hxge_: 6hxg E: [367814]
      automated match to d5lnub_
      complexed with so4
    6. 2827765Domain d6hxgf_: 6hxg F: [367818]
      automated match to d5lnsd_
      complexed with so4
    7. 2827766Domain d6hxgg_: 6hxg G: [367802]
      automated match to d5lnub_
      complexed with so4
    8. 2827767Domain d6hxgh_: 6hxg H: [367793]
      automated match to d5lnsd_
      complexed with so4
  11. Domain(s) for 6hye:
    1. 2827784Domain d6hyea_: 6hye A: [368165]
      automated match to d5lnub_
      complexed with so4
    2. 2827785Domain d6hyeb_: 6hye B: [368142]
      automated match to d5lnub_
      complexed with so4
    3. 2827786Domain d6hyec_: 6hye C: [368122]
      automated match to d5lnub_
      complexed with so4
    4. 2827787Domain d6hyed_: 6hye D: [368161]
      automated match to d5lnub_
      complexed with so4
    5. 2827788Domain d6hyee_: 6hye E: [368123]
      automated match to d5lnub_
      complexed with so4
    6. 2827789Domain d6hyef_: 6hye F: [368124]
      automated match to d5lnub_
      complexed with so4
    7. 2827790Domain d6hyeg_: 6hye G: [368163]
      automated match to d5lnub_
      complexed with so4
    8. 2827791Domain d6hyeh_: 6hye H: [368125]
      automated match to d5lnub_
      complexed with so4

More info for Species Thale cress (Arabidopsis thaliana) [TaxId:3702] from c.1.2.0 automated matches

Timeline for Species Thale cress (Arabidopsis thaliana) [TaxId:3702] from c.1.2.0 automated matches: