Lineage for d1c9ka_ (1c9k A:)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2109203Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 2109204Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families) (S)
    division into families based on beta-sheet topologies
  5. 2112131Family c.37.1.11: RecA protein-like (ATPase-domain) [52670] (21 protein domains)
    core: mixed beta-sheet of 8 strands, order 32451678; strand 7 is antiparallel to the rest
  6. 2112132Protein Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU [52682] (1 species)
    lacks the last strand 8
  7. 2112133Species Salmonella typhimurium [TaxId:90371] [52683] (2 PDB entries)
  8. 2112134Domain d1c9ka_: 1c9k A: [32363]
    complexed with 5gp, mg, po4, pop

Details for d1c9ka_

PDB Entry: 1c9k (more details), 2.2 Å

PDB Description: the three dimensional structure of adenosylcobinamide kinase/ adenosylcobinamide phosphate gualylyltransferase (cobu) complexed with gmp: evidence for a substrate induced transferase active site
PDB Compounds: (A:) adenosylcobinamide kinase

SCOPe Domain Sequences for d1c9ka_:

Sequence, based on SEQRES records: (download)

>d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]}
milvtggarsgksrhaealigdapqvlyiatsqilddemaariqhhkdgrpahwrtaecw
rhldtlitadlapddaillecittmvtnllfalggendpeqwdyaameraiddeiqilia
acqrcpakvvlvtnevgmgivpenrlarhfrdiagrvnqrlaaaadevwlvvsgigvkik

Sequence, based on observed residues (ATOM records): (download)

>d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]}
milvtggarsgksrhaealigdapqvlyiatsqiariqhhkdgrpahwrtaecwrhldtl
itadlapddaillecittmvtnllfaldpeqwdyaameraiddeiqiliaacqrcpakvv
lvtnevgmgivpenrlarhfrdiagrvnqrlaaaadevwlvvsgigvkik

SCOPe Domain Coordinates for d1c9ka_:

Click to download the PDB-style file with coordinates for d1c9ka_.
(The format of our PDB-style files is described here.)

Timeline for d1c9ka_: