SCOPe 2.08: Domain d5khma1: 5khm A:44-168

Lineage for d5khma1 (5khm A:44-168)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.29: Bromodomain-like [47363] (15 superfamilies)
   4 helices; bundle; minor mirror variant of up-and-down topology

4. Superfamily a.29.2: Bromodomain [47370] (2 families)

5. Family a.29.2.0: automated matches [191428] (1 protein)
   not a true family

6. Protein automated matches [190615] (15 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [187641] (1052 PDB entries)

8. Domain d5khma1: 5khm A:44-168 [322998]
   Other proteins in same PDB: d5khma2, d5khmb2
   automated match to d4hbwa_
   complexed with gol, xnh

Details for d5khma1

PDB Entry: 5khm, 1.48 Å

PDB Description: the first bet bromodomain of brd4 bound to compound 13 in a bivalent manner

PDB Compounds: (A:) Bromodomain-containing protein 4

SCOPe Domain Sequences for d5khma1:

Sequence; same for both SEQRES and ATOM records:

>d5khma1 a.29.2.0 (A:44-168) automated matches {Human (Homo sapiens) [TaxId: 9606]}
nppppetsnpnkpkrqtnqlqyllrvvlktlwkhqfawpfqqpvdavklnlpdyykiikt
pmdmgtikkrlennyywnaqeciqdfntmftncyiynkpgddivlmaealeklflqkine
lptee

Timeline for d5khma1:

• d5khma1 first appeared in SCOPe 2.06
  
• d5khma1 appears in SCOPe 2.07