SCOPe 2.08: Domain d5aypb_: 5ayp B:

Lineage for d5aypb_ (5ayp B:)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.128: Terpenoid synthases [48575] (1 superfamily)
   multihelical; core: 8 helices (C-J) are arranged in 2 parallel layers

4. Superfamily a.128.1: Terpenoid synthases [48576] (6 families)
   duplication: two metal-binding sites are related by a pseudo dyad that also relates helices C-F to helices G-J

5. Family a.128.1.0: automated matches [196408] (1 protein)
   not a true family

6. Protein automated matches [196409] (46 species)
   not a true protein

7. Species Geobacillus stearothermophilus [TaxId:1422] [322626] (1 PDB entry)

8. Domain d5aypb_: 5ayp B: [322675]
   automated match to d1rtra_

Details for d5aypb_

PDB Entry: 5ayp, 2.31 Å

PDB Description: crystal structure of bacillus stearothermophilus farnesyl pyrophosphate synthase

PDB Compounds: (B:) Farnesyl Diphosphate Synthase

SCOPe Domain Sequences for d5aypb_:

Sequence, based on SEQRES records:

>d5aypb_ a.128.1.0 (B:) automated matches {Geobacillus stearothermophilus [TaxId: 1422]}
qlsveqflneqkqavetalsryierlegpaklkkamaysleaggkrirpllllstvralg
kdpavglpvacaiemihtyslihddlpsmdnddlrrgkptnhkvfgeamailagdgllty
afqliteidderippsvrlrlierlakaagpegmvagqaadmegegktltlseleyihrh
ktgkmlqysvhagaliggadarqtreldefaahlglafqirddildiegaeekigkpvgs
dqsnnkatypallslagakeklafhieaaqrhlrnadvdgaalayicelvaar

Sequence, based on observed residues (ATOM records):

>d5aypb_ a.128.1.0 (B:) automated matches {Geobacillus stearothermophilus [TaxId: 1422]}
qlsveqflneqkqavetalsryierlegpaklkkamaysleaggkrirpllllstvralg
kdpavglpvacaiemihtyslihddlpsmkptnhkvfgeamailagdglltyafqlitei
dderippsvrlrlierlakaagpegmvagqaadmegegktltlseleyihrhktgkmlqy
svhagaliggadarqtreldefaahlglafqirddildtypallslagakeklafhieaa
qrhlrnadvdgaalayicelvaar

Timeline for d5aypb_:

• d5aypb_ first appeared in SCOPe 2.06
  
• d5aypb_ appears in SCOPe 2.07