Lineage for d5aypa_ (5ayp A:)

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2337561Fold a.128: Terpenoid synthases [48575] (1 superfamily)
    multihelical; core: 8 helices (C-J) are arranged in 2 parallel layers
  4. 2337562Superfamily a.128.1: Terpenoid synthases [48576] (6 families) (S)
    duplication: two metal-binding sites are related by a pseudo dyad that also relates helices C-F to helices G-J
  5. 2337969Family a.128.1.0: automated matches [196408] (1 protein)
    not a true family
  6. 2337970Protein automated matches [196409] (38 species)
    not a true protein
  7. 2338007Species Geobacillus stearothermophilus [TaxId:1422] [322626] (1 PDB entry)
  8. 2338008Domain d5aypa_: 5ayp A: [322627]
    automated match to d1rtra_

Details for d5aypa_

PDB Entry: 5ayp (more details), 2.31 Å

PDB Description: crystal structure of bacillus stearothermophilus farnesyl pyrophosphate synthase
PDB Compounds: (A:) Farnesyl Diphosphate Synthase

SCOPe Domain Sequences for d5aypa_:

Sequence, based on SEQRES records: (download)

>d5aypa_ a.128.1.0 (A:) automated matches {Geobacillus stearothermophilus [TaxId: 1422]}
qlsveqflneqkqavetalsryierlegpaklkkamaysleaggkrirpllllstvralg
kdpavglpvacaiemihtyslihddlpsmdnddlrrgkptnhkvfgeamailagdgllty
afqliteidderippsvrlrlierlakaagpegmvagqaadmegegktltlseleyihrh
ktgkmlqysvhagaliggadarqtreldefaahlglafqirddildiegaeekigkpvgs
dqsnnkatypallslagakeklafhieaaqrhlrnadvdgaalayicelvaar

Sequence, based on observed residues (ATOM records): (download)

>d5aypa_ a.128.1.0 (A:) automated matches {Geobacillus stearothermophilus [TaxId: 1422]}
qlsveqflneqkqavetalsryierlegpaklkkamaysleaggkrirpllllstvralg
kdpavglpvacaiemihtyslihddlpsmdnddlrrgkptnhkvfgeamailagdgllty
afqlitederippsvrlrlierlakaagpegmvagqaadmegegktltlseleyihrhkt
gkmlqysvhagaliggadarqtreldefaahlglafqirlagakeklafhieaaqrhlrn
advdgaalayicelvaar

SCOPe Domain Coordinates for d5aypa_:

Click to download the PDB-style file with coordinates for d5aypa_.
(The format of our PDB-style files is described here.)

Timeline for d5aypa_:

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d5aypb_