SCOPe 2.08: Domain d5f7va_: 5f7v A:

Lineage for d5f7va_ (5f7v A:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
   consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
   mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest

4. Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families)
   Similar in architecture to the superfamily I but partly differs in topology

5. Family c.94.1.0: automated matches [191309] (1 protein)
   not a true family

6. Protein automated matches [190039] (161 species)
   not a true protein

7. Species Listeria monocytogenes [TaxId:169963] [193523] (5 PDB entries)

8. Domain d5f7va_: 5f7v A: [322168]
   automated match to d4qrza_
   protein/RNA complex

Details for d5f7va_

PDB Entry: 5f7v, 1.4 Å

PDB Description: abc substrate-binding protein lmo0181 from listeria monocytogenes in complex with cycloalternan

PDB Compounds: (A:) Lmo0181 protein

SCOPe Domain Sequences for d5f7va_:

Sequence, based on SEQRES records:

>d5f7va_ c.94.1.0 (A:) automated matches {Listeria monocytogenes [TaxId: 169963]}
dkteityyqfsapadgkaldemvkefekqnpdikvnvqtiafndyftklqtqiaggdapd
afelnyetfmqyaekgvladltsyiekdkdfdpstlnkqaydafkydgkqygmvesfsnv
vtiynkdlfdkagveyptadwtwkdeeaaakkltdaknkvwgtsqpvtmnefykvaaqng
gsifnedltettinspenvealthltnevtdskvapspadlsgqlpedlfmngqiamlht
giwlfdmfqdapfkwdvqveagntqkathffangigvskdsdkkeaafkfasfmsaneea
akiridnnwelpatenkeilqpyldatppdnreavfeslqymvlppvvkdwnkisdytns
efekvlngdstpekalknsedninktmgfk

Sequence, based on observed residues (ATOM records):

>d5f7va_ c.94.1.0 (A:) automated matches {Listeria monocytogenes [TaxId: 169963]}
dkteityyqfsapgkaldemvkefekqnpdikvnvqtiafndyftklqtqiaggdapdaf
elnyetfmqyaekgvladltsyiekdkdfdpstlnkqaydafkydgkqygmvesfsnvvt
iynkdlfdkagveyptadwtwkdeeaaakkltdaknkvwgtsqpvtmnefykvaaqnggs
ifnedltettinspenvealthltnevtdskvapspadlsgqlpedlfmngqiamlhtgi
wlfdmfqdapfkwdvqveagntqkathffangigvskdsdkkeaafkfasfmsaneeaak
iridnnwelpatenkeilqpyldatppdnreavfeslqymvlppvvkdwnkisdytnsef
ekvlngdstpekalknsedninktmgfk

Timeline for d5f7va_:

• d5f7va_ first appeared in SCOPe 2.06
  
• d5f7va_ appears in SCOPe 2.07