Lineage for d5lata_ (5lat A:)

  1. Root: SCOPe 2.06
  2. 2021373Class b: All beta proteins [48724] (177 folds)
  3. 2080271Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
    one turn of helix is made by two pairs of antiparallel strands linked with short turns
    has appearance of a sandwich of distinct architecture and jelly-roll topology
  4. 2081124Superfamily b.82.2: Clavaminate synthase-like [51197] (16 families) (S)
    Iron and ketoglutarate-dependent enzymes; elaborated version of this common fold
  5. 2081872Family b.82.2.15: proly-4-hydroxylase (P4H, PHD) like [254173] (3 proteins)
    Pfam PF13640; PubMed 16782814
  6. 2081880Protein automated matches [254532] (2 species)
    not a true protein
  7. 2081888Species Human (Homo sapiens) [TaxId:9606] [255179] (25 PDB entries)
  8. 2081906Domain d5lata_: 5lat A: [322108]
    automated match to d3ouja_
    protein/DNA complex; complexed with bct, gol, mn, un9

Details for d5lata_

PDB Entry: 5lat (more details), 1.9 Å

PDB Description: hif prolyl hydroxylase 2 (phd2/egln1) p317r variant in complex with mn(ii) and n-[(1-chloro-4-hydroxyisoquinolin-3-yl)carbonyl]glycine (iox3/un9)
PDB Compounds: (A:) Egl nine homolog 1

SCOPe Domain Sequences for d5lata_:

Sequence, based on SEQRES records: (download)

>d5lata_ b.82.2.15 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
lpalklaleyivpcmnkhgicvvddflgketgqqigdevralhdtgkftdgqlvsqksds
skdirgdkitwiegkepgcetigllmssmddlirhcngklgsykingrtkamvacypgng
tgyvrhvdnrngdgrcvtciyylnkdwdakvsggilrifpegkaqfadiepkfdrllffw
sdrrnphevqpayatryaitvwyfdaderarakvkyltgekgvr

Sequence, based on observed residues (ATOM records): (download)

>d5lata_ b.82.2.15 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
lpalklaleyivpcmnkhgicvvddflgketgqqigdevralhdtgkftdgqlvsqksds
skdirgdkitwiegkepgcetigllmssmddlirhcngklgsykingrtkamvacypgng
tgyvrhvdnrngdgrcvtciyylnkdwdakvsggilrifpegkaqfadiepkfdrllffw
sdrrnphevqpayatryaitvwyfdaderarakvkylkgvr

SCOPe Domain Coordinates for d5lata_:

Click to download the PDB-style file with coordinates for d5lata_.
(The format of our PDB-style files is described here.)

Timeline for d5lata_: