SCOPe 2.08: Species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Lineage for Species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Root: SCOPe 2.08
Class a: All alpha proteins [46456] (290 folds)
Fold a.29: Bromodomain-like [47363] (15 superfamilies)
4 helices; bundle; minor mirror variant of up-and-down topology
Superfamily a.29.3: Acyl-CoA dehydrogenase C-terminal domain-like [47203] (3 families)
multidomain flavoprotein; N-terminal domain is all-alpha; the middle domain is open (5,8) barrel
Family a.29.3.0: automated matches [227204] (1 protein)
not a true family
Protein automated matches [226935] (30 species)
not a true protein
Species Nematode (Caenorhabditis elegans) [TaxId:6239] [321815] (4 PDB entries)

PDB entries in Species: Nematode (Caenorhabditis elegans) [TaxId: 6239]:

Domain(s) for 5k3g:
1. Domain d5k3ga2: 5k3g A:297-483 [344303]
  Other proteins in same PDB: d5k3ga1, d5k3gb1, d5k3gc1, d5k3gd1
  automated match to d5k3ic2
2. Domain d5k3ga3: 5k3g A:484-669 [344304]
  Other proteins in same PDB: d5k3ga1, d5k3gb1, d5k3gc1, d5k3gd1
  automated match to d5k3ic3
3. Domain d5k3gb2: 5k3g B:297-483 [344306]
  Other proteins in same PDB: d5k3ga1, d5k3gb1, d5k3gc1, d5k3gd1
  automated match to d5k3ic2
4. Domain d5k3gb3: 5k3g B:484-669 [344307]
  Other proteins in same PDB: d5k3ga1, d5k3gb1, d5k3gc1, d5k3gd1
  automated match to d5k3ic3
5. Domain d5k3gc2: 5k3g C:299-483 [344309]
  Other proteins in same PDB: d5k3ga1, d5k3gb1, d5k3gc1, d5k3gd1
  automated match to d5k3ic2
6. Domain d5k3gc3: 5k3g C:484-669 [344310]
  Other proteins in same PDB: d5k3ga1, d5k3gb1, d5k3gc1, d5k3gd1
  automated match to d5k3ic3
7. Domain d5k3gd2: 5k3g D:299-484 [321816]
  Other proteins in same PDB: d5k3ga1, d5k3gb1, d5k3gc1, d5k3gd1
  automated match to d1is2a1
8. Domain d5k3gd3: 5k3g D:487-669 [321817]
  Other proteins in same PDB: d5k3ga1, d5k3gb1, d5k3gc1, d5k3gd1
  automated match to d2ddha2
Domain(s) for 5k3h:
1. Domain d5k3ha2: 5k3h A:297-483 [345727]
  Other proteins in same PDB: d5k3ha1, d5k3hb1, d5k3hc1, d5k3hd1, d5k3he1, d5k3hf1, d5k3hg1, d5k3hh1
  automated match to d5k3ic2
2. Domain d5k3ha3: 5k3h A:484-669 [345728]
  Other proteins in same PDB: d5k3ha1, d5k3hb1, d5k3hc1, d5k3hd1, d5k3he1, d5k3hf1, d5k3hg1, d5k3hh1
  automated match to d5k3ic3
3. Domain d5k3hb2: 5k3h B:299-483 [345730]
  Other proteins in same PDB: d5k3ha1, d5k3hb1, d5k3hc1, d5k3hd1, d5k3he1, d5k3hf1, d5k3hg1, d5k3hh1
  automated match to d5k3ic2
4. Domain d5k3hb3: 5k3h B:484-669 [345731]
  Other proteins in same PDB: d5k3ha1, d5k3hb1, d5k3hc1, d5k3hd1, d5k3he1, d5k3hf1, d5k3hg1, d5k3hh1
  automated match to d5k3ic3
5. Domain d5k3hc2: 5k3h C:299-483 [345733]
  Other proteins in same PDB: d5k3ha1, d5k3hb1, d5k3hc1, d5k3hd1, d5k3he1, d5k3hf1, d5k3hg1, d5k3hh1
  automated match to d5k3ic2
6. Domain d5k3hc3: 5k3h C:484-669 [345734]
  Other proteins in same PDB: d5k3ha1, d5k3hb1, d5k3hc1, d5k3hd1, d5k3he1, d5k3hf1, d5k3hg1, d5k3hh1
  automated match to d5k3ic3
7. Domain d5k3hd2: 5k3h D:299-483 [345736]
  Other proteins in same PDB: d5k3ha1, d5k3hb1, d5k3hc1, d5k3hd1, d5k3he1, d5k3hf1, d5k3hg1, d5k3hh1
  automated match to d5k3ic2
8. Domain d5k3hd3: 5k3h D:484-669 [345737]
  Other proteins in same PDB: d5k3ha1, d5k3hb1, d5k3hc1, d5k3hd1, d5k3he1, d5k3hf1, d5k3hg1, d5k3hh1
  automated match to d5k3ic3
9. Domain d5k3he2: 5k3h E:299-483 [345739]
  Other proteins in same PDB: d5k3ha1, d5k3hb1, d5k3hc1, d5k3hd1, d5k3he1, d5k3hf1, d5k3hg1, d5k3hh1
  automated match to d5k3ic2
10. Domain d5k3he3: 5k3h E:484-669 [345740]
  Other proteins in same PDB: d5k3ha1, d5k3hb1, d5k3hc1, d5k3hd1, d5k3he1, d5k3hf1, d5k3hg1, d5k3hh1
  automated match to d5k3ic3
11. Domain d5k3hf2: 5k3h F:299-483 [345742]
  Other proteins in same PDB: d5k3ha1, d5k3hb1, d5k3hc1, d5k3hd1, d5k3he1, d5k3hf1, d5k3hg1, d5k3hh1
  automated match to d5k3ic2
12. Domain d5k3hf3: 5k3h F:484-669 [345743]
  Other proteins in same PDB: d5k3ha1, d5k3hb1, d5k3hc1, d5k3hd1, d5k3he1, d5k3hf1, d5k3hg1, d5k3hh1
  automated match to d5k3ic3
13. Domain d5k3hg2: 5k3h G:299-483 [345745]
  Other proteins in same PDB: d5k3ha1, d5k3hb1, d5k3hc1, d5k3hd1, d5k3he1, d5k3hf1, d5k3hg1, d5k3hh1
  automated match to d5k3ic2
14. Domain d5k3hg3: 5k3h G:484-669 [345746]
  Other proteins in same PDB: d5k3ha1, d5k3hb1, d5k3hc1, d5k3hd1, d5k3he1, d5k3hf1, d5k3hg1, d5k3hh1
  automated match to d5k3ic3
15. Domain d5k3hh2: 5k3h H:299-483 [345748]
  Other proteins in same PDB: d5k3ha1, d5k3hb1, d5k3hc1, d5k3hd1, d5k3he1, d5k3hf1, d5k3hg1, d5k3hh1
  automated match to d5k3ic2
16. Domain d5k3hh3: 5k3h H:484-669 [345749]
  Other proteins in same PDB: d5k3ha1, d5k3hb1, d5k3hc1, d5k3hd1, d5k3he1, d5k3hf1, d5k3hg1, d5k3hh1
  automated match to d5k3ic3
Domain(s) for 5k3i:
1. Domain d5k3ia2: 5k3i A:290-483 [344312]
  Other proteins in same PDB: d5k3ia1, d5k3ib1, d5k3ic1, d5k3id1, d5k3ie1, d5k3if1, d5k3ig1, d5k3ih1
  automated match to d5k3ic2
  complexed with atp, fad, mg
2. Domain d5k3ia3: 5k3i A:484-669 [344313]
  Other proteins in same PDB: d5k3ia1, d5k3ib1, d5k3ic1, d5k3id1, d5k3ie1, d5k3if1, d5k3ig1, d5k3ih1
  automated match to d5k3ic3
  complexed with atp, fad, mg
3. Domain d5k3ib2: 5k3i B:290-483 [344315]
  Other proteins in same PDB: d5k3ia1, d5k3ib1, d5k3ic1, d5k3id1, d5k3ie1, d5k3if1, d5k3ig1, d5k3ih1
  automated match to d5k3ic2
  complexed with atp, fad, mg
4. Domain d5k3ib3: 5k3i B:484-669 [344316]
  Other proteins in same PDB: d5k3ia1, d5k3ib1, d5k3ic1, d5k3id1, d5k3ie1, d5k3if1, d5k3ig1, d5k3ih1
  automated match to d5k3ic3
  complexed with atp, fad, mg
5. Domain d5k3ic2: 5k3i C:290-483 [322307]
  Other proteins in same PDB: d5k3ia1, d5k3ib1, d5k3ic1, d5k3id1, d5k3ie1, d5k3if1, d5k3ig1, d5k3ih1
  automated match to d1is2a1
  complexed with atp, fad, mg
6. Domain d5k3ic3: 5k3i C:488-669 [322308]
  Other proteins in same PDB: d5k3ia1, d5k3ib1, d5k3ic1, d5k3id1, d5k3ie1, d5k3if1, d5k3ig1, d5k3ih1
  automated match to d2ddha2
  complexed with atp, fad, mg
7. Domain d5k3id2: 5k3i D:290-483 [322209]
  Other proteins in same PDB: d5k3ia1, d5k3ib1, d5k3ic1, d5k3id1, d5k3ie1, d5k3if1, d5k3ig1, d5k3ih1
  automated match to d1is2a1
  complexed with atp, fad, mg
8. Domain d5k3id3: 5k3i D:488-669 [322210]
  Other proteins in same PDB: d5k3ia1, d5k3ib1, d5k3ic1, d5k3id1, d5k3ie1, d5k3if1, d5k3ig1, d5k3ih1
  automated match to d2ddha2
  complexed with atp, fad, mg
9. Domain d5k3ie2: 5k3i E:290-483 [344318]
  Other proteins in same PDB: d5k3ia1, d5k3ib1, d5k3ic1, d5k3id1, d5k3ie1, d5k3if1, d5k3ig1, d5k3ih1
  automated match to d5k3ic2
  complexed with atp, fad, mg
10. Domain d5k3ie3: 5k3i E:484-669 [344319]
  Other proteins in same PDB: d5k3ia1, d5k3ib1, d5k3ic1, d5k3id1, d5k3ie1, d5k3if1, d5k3ig1, d5k3ih1
  automated match to d5k3ic3
  complexed with atp, fad, mg
11. Domain d5k3if2: 5k3i F:290-481 [322438]
  Other proteins in same PDB: d5k3ia1, d5k3ib1, d5k3ic1, d5k3id1, d5k3ie1, d5k3if1, d5k3ig1, d5k3ih1
  automated match to d1is2a1
  complexed with atp, fad, mg
12. Domain d5k3if3: 5k3i F:488-669 [322439]
  Other proteins in same PDB: d5k3ia1, d5k3ib1, d5k3ic1, d5k3id1, d5k3ie1, d5k3if1, d5k3ig1, d5k3ih1
  automated match to d2ddha2
  complexed with atp, fad, mg
13. Domain d5k3ig2: 5k3i G:290-482 [322315]
  Other proteins in same PDB: d5k3ia1, d5k3ib1, d5k3ic1, d5k3id1, d5k3ie1, d5k3if1, d5k3ig1, d5k3ih1
  automated match to d1is2a1
  complexed with atp, fad, mg
14. Domain d5k3ig3: 5k3i G:487-669 [322316]
  Other proteins in same PDB: d5k3ia1, d5k3ib1, d5k3ic1, d5k3id1, d5k3ie1, d5k3if1, d5k3ig1, d5k3ih1
  automated match to d2ddha2
  complexed with atp, fad, mg
15. Domain d5k3ih2: 5k3i H:290-483 [344321]
  Other proteins in same PDB: d5k3ia1, d5k3ib1, d5k3ic1, d5k3id1, d5k3ie1, d5k3if1, d5k3ig1, d5k3ih1
  automated match to d5k3ic2
  complexed with atp, fad, mg
16. Domain d5k3ih3: 5k3i H:484-669 [344322]
  Other proteins in same PDB: d5k3ia1, d5k3ib1, d5k3ic1, d5k3id1, d5k3ie1, d5k3if1, d5k3ig1, d5k3ih1
  automated match to d5k3ic3
  complexed with atp, fad, mg
Domain(s) for 5k3j:
1. Domain d5k3ja2: 5k3j A:279-474 [322217]
  Other proteins in same PDB: d5k3ja1, d5k3ja4, d5k3jb1, d5k3jb4
  automated match to d1is2a1
  complexed with 6qa, atp, fad, mg
2. Domain d5k3ja3: 5k3j A:475-661 [322218]
  Other proteins in same PDB: d5k3ja1, d5k3ja4, d5k3jb1, d5k3jb4
  automated match to d2ddha2
  complexed with 6qa, atp, fad, mg
3. Domain d5k3jb2: 5k3j B:279-474 [322444]
  Other proteins in same PDB: d5k3ja1, d5k3ja4, d5k3jb1, d5k3jb4
  automated match to d1is2a1
  complexed with 6qa, atp, fad, mg
4. Domain d5k3jb3: 5k3j B:475-661 [322445]
  Other proteins in same PDB: d5k3ja1, d5k3ja4, d5k3jb1, d5k3jb4
  automated match to d2ddha2
  complexed with 6qa, atp, fad, mg

More info for Species Nematode (Caenorhabditis elegans) [TaxId:6239] from a.29.3.0 automated matches

Timeline for Species Nematode (Caenorhabditis elegans) [TaxId:6239] from a.29.3.0 automated matches:

Species Nematode (Caenorhabditis elegans) [TaxId:6239] from a.29.3.0 automated matches first appeared in SCOPe 2.06, called Species Caenorhabditis elegans [TaxId:6239] from a.29.3.0 automated matches
Species Nematode (Caenorhabditis elegans) [TaxId:6239] from a.29.3.0 automated matches appears in SCOPe 2.07