SCOPe 2.08: Domain d5j8xa1: 5j8x A:4-262

Lineage for d5j8xa1 (5j8x A:4-262)

1. Root: SCOPe 2.08

2. Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)

3. Fold e.3: beta-lactamase/transpeptidase-like [56600] (1 superfamily)
   contains a cluster of helices and an alpha+beta sandwich

4. Superfamily e.3.1: beta-lactamase/transpeptidase-like [56601] (4 families)

5. Family e.3.1.1: beta-Lactamase/D-ala carboxypeptidase [56602] (19 proteins)
   in the multi-domain class (e), this applies to domains with different numbers of (sub)domains than the most common domain
   

6. Protein automated matches [190161] (29 species)
   not a true protein

7. Species Escherichia coli [TaxId:83333] [321358] (1 PDB entry)

8. Domain d5j8xa1: 5j8x A:4-262 [321359]
   Other proteins in same PDB: d5j8xa2
   automated match to d1nj4a2
   complexed with ok3

Details for d5j8xa1

PDB Entry: 5j8x, 2.53 Å

PDB Description: crystal structure of e. coli pbp5 with 2c

PDB Compounds: (A:) D-alanyl-D-alanine carboxypeptidase dacA

SCOPe Domain Sequences for d5j8xa1:

Sequence, based on SEQRES records:

>d5j8xa1 e.3.1.1 (A:4-262) automated matches {Escherichia coli [TaxId: 83333]}
niktmipgvpqidaesyilidynsgkvlaeqnadvrrdpasltkmmtsyvigqamkagkf
ketdlvtigndawatgnpvfkgsslmflkpgmqvpvsqlirginlqsgndacvamadfaa
gsqdafvglmnsyvnalglknthfqtvhgldadgqyssardmaligqalirdvpneysiy
kekeftfngirqlnrngllwdnslnvdgiktghtdkagynlvasategqmrlisavmggr
tfkgreaeskklltwgfrf

Sequence, based on observed residues (ATOM records):

>d5j8xa1 e.3.1.1 (A:4-262) automated matches {Escherichia coli [TaxId: 83333]}
niktmipgvpqidaesyilidynsgkvlaeqnadvrrdpasltkmmtsyvigqamkagkf
ketdlvtignmflkpgmqvpvsqlirginlqsgndacvamadfaagsqdafvglmnsyvn
alglknthfqtvhgldadgqyssardmaligqalirdvpneysiykekeftfngirqlnr
ngllwdnslnvdgiktghtdkagynlvasategqmrlisavmggrtfkgreaeskklltw
gfrf

Timeline for d5j8xa1:

• d5j8xa1 first appeared in SCOPe 2.06
  
• d5j8xa1 appears in SCOPe 2.07