SCOPe 2.08: Domain d5hs9b_: 5hs9 B:

Lineage for d5hs9b_ (5hs9 B:)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
   core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down

4. Superfamily a.4.5: 'Winged helix' DNA-binding domain [46785] (86 families)
   contains a small beta-sheet (wing)

5. Family a.4.5.0: automated matches [191329] (1 protein)
   not a true family

6. Protein automated matches [190154] (92 species)
   not a true protein

7. Species Bacillus subtilis [TaxId:224308] [321300] (5 PDB entries)

8. Domain d5hs9b_: 5hs9 B: [321301]
   automated match to d4hqmb_

Details for d5hs9b_

PDB Entry: 5hs9, 2.1 Å

PDB Description: crystal structure of the quinone-bound yodb from b. subtilis

PDB Compounds: (B:) HTH-type transcriptional regulator YodB

SCOPe Domain Sequences for d5hs9b_:

Sequence, based on SEQRES records:

>d5hs9b_ a.4.5.0 (B:) automated matches {Bacillus subtilis [TaxId: 224308]}
mcpkmesafsllgkrwngliihvlmdgpkrfkeitetipmisqkmlaerlkeleqneive
rqvlpetpvkviytltekgtalqavfqemqawadqf

Sequence, based on observed residues (ATOM records):

>d5hs9b_ a.4.5.0 (B:) automated matches {Bacillus subtilis [TaxId: 224308]}
mcpkmesafsllgkrwngliihvlmdgpkrfkeitetipmisqkmlaerlkeleqneive
rqvlviytltekgtalqavfqemqawadqf

Timeline for d5hs9b_:

• d5hs9b_ first appeared in SCOPe 2.06
  
• d5hs9b_ appears in SCOPe 2.07