SCOPe 2.08: Domain d5d5sa_: 5d5s A:

Lineage for d5d5sa_ (5d5s A:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
   main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest

4. Superfamily c.67.1: PLP-dependent transferases [53383] (10 families)

5. Family c.67.1.3: Cystathionine synthase-like [53402] (17 proteins)

6. Protein automated matches [190399] (10 species)
   not a true protein

7. Species Citrobacter freundii [TaxId:546] [261234] (7 PDB entries)

8. Domain d5d5sa_: 5d5s A: [321281]
   automated match to d1y4ia1
   complexed with na, peg, plp; mutant

Details for d5d5sa_

PDB Entry: 5d5s, 1.7 Å

PDB Description: crystal structure of methionine gamma-lyase from citrobacter freundii, s339a mutant

PDB Compounds: (A:) methionine gamma-lyase

SCOPe Domain Sequences for d5d5sa_:

Sequence, based on SEQRES records:

>d5d5sa_ c.67.1.3 (A:) automated matches {Citrobacter freundii [TaxId: 546]}
sdcrtygfntqivhagqqpdpstgalstpifqtstfvfdsaeqgaarfaleesgyiytrl
gnpttdalekklavlergeaglatasgisaitttlltlcqqgdhivsasaiygcthafls
hsmpkfginvsfvdaakpeeiraamrpetkvvyietpanptlslvdietvagiahqqgal
lvvdntfmspycqqplqlgadivvhsvtkyinghgdviggiivgkqefidqarfvglkdi
tggcmspfnawltlrgvktlgirmerhcenalkiarfleghpsitrvyypglsshpqyel
gqrqmslpggiisfeiaggleagrrminsvelcllavalgdtetliqhpasmthspvape
erlkagitdglirlsvgledpediindlehairkat

Sequence, based on observed residues (ATOM records):

>d5d5sa_ c.67.1.3 (A:) automated matches {Citrobacter freundii [TaxId: 546]}
sdcrtygfntqivhagqqpdpstgalstpifqtstfvfdsaeqggnpttdalekklavle
rgeaglatasgisaitttlltlcqqgdhivsasaiygcthaflshsmpkfginvsfvdaa
kpeeiraamrpetkvvyietpanptlslvdietvagiahqqgallvvdntfmspycqqpl
qlgadivvhsvtkyinghgdviggiivgkqefidqarfvglkditggcmspfnawltlrg
vktlgirmerhcenalkiarfleghpsitrvyypglsshpqyelgqrqmslpggiisfei
aggleagrrminsvelcllavalgdtetliqhpasmthspvapeerlkagitdglirlsv
gledpediindlehairkat

Timeline for d5d5sa_:

• d5d5sa_ first appeared in SCOPe 2.06
  
• d5d5sa_ appears in SCOPe 2.07