Lineage for d5k82d_ (5k82 D:)

  1. Root: SCOPe 2.08
  2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. Fold c.97: Cytidine deaminase-like [53926] (2 superfamilies)
    core: alpha-beta(2)-(alpha-beta)2; 3 layers (a/b/a); mixed beta-sheet of 4 strands, order 2134; strand 1 is antiparallel to the rest
  4. Superfamily c.97.1: Cytidine deaminase-like [53927] (7 families) (S)
    contains extra C-terminal strand 5, order 21345
  5. Family c.97.1.6: apolipoprotein B messenger RNA-editing enzyme catalytic (APOBEC) cytidine deaminase domains [310632] (5 proteins)
    strand 5 is parallel to strand 4
    Pfam PF08210; Pfam PF05240
  6. Protein APOBEC3G (ARCD) [310757] (2 species)
  7. Species Rhesus monkey (Macaca mulatta) [TaxId:9544] [346337] (6 PDB entries)
  8. Domain d5k82d_: 5k82 D: [321137]
    automated match to d3vm8a_
    complexed with zn

Details for d5k82d_

PDB Entry: 5k82 (more details), 2.9099999999999997 Å

PDB Description: crystal structure of a primate apobec3g n-terminal domain
PDB Compounds: (D:) Apolipoprotein B mRNA editing enzyme, catalytic peptide-like 3G,Apolipoprotein B mRNA editing enzyme, catalytic peptide-like 3G

SCOPe Domain Sequences for d5k82d_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5k82d_ c.97.1.6 (D:) APOBEC3G (ARCD) {Rhesus monkey (Macaca mulatta) [TaxId: 9544]}
mkpqirnmvepmdprtfvsnfnnrpilsgldtvwlccevktkdpsgppldakifqgkvyp
kakyhpemrflrwfhkwrqlhhdqeykvtwyvswspctrcansvatflakdpkvtltifv
arlyyfwkpdyqqalrilaeagatmkimnynefqdcwnkfvdgrgkpfkpwnnlpkhytl
lqatlgellrh

SCOPe Domain Coordinates for d5k82d_ are not available.

Timeline for d5k82d_:

View in 3D
Domains from other chains:
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d5k82a_, d5k82b_, d5k82c_