SCOPe 2.04: Domain d1bofa2: 1bof A:10-60,A:182-354

Lineage for d1bofa2 (1bof A:10-60,A:182-354)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (25 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.8: G proteins [52592] (79 proteins)
   core: mixed beta-sheet of 6 strands, order 231456; strand 2 is antiparallel to the rest

6. Protein Transducin (alpha subunit) [52623] (4 species)
   common fold is interrupted with an all-alpha domain

7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [52625] (21 PDB entries)
   Uniprot P10824

8. Domain d1bofa2: 1bof A:10-60,A:182-354 [32100]
   Other proteins in same PDB: d1bofa1
   complexed with gdp, mg, so4

Details for d1bofa2

PDB Entry: 1bof, 2.2 Å

PDB Description: gi-alpha-1 bound to gdp and magnesium

PDB Compounds: (A:) gi alpha 1

SCOPe Domain Sequences for d1bofa2:

Sequence, based on SEQRES records:

>d1bofa2 c.37.1.8 (A:10-60,A:182-354) Transducin (alpha subunit) {Norway rat (Rattus norvegicus) [TaxId: 10116]}
kaaverskmidrnlredgekaarevkllllgagesgkstivkqmkiiheagXtgivethf
tfkdlhfkmfdvggqrserkkwihcfegvtaiifcvalsdydlvlaedeemnrmhesmkl
fdsicnnkwftdtsiilflnkkdlfeekikksplticypeyagsntyeeaaayiqcqfed
lnkrkdtkeiythftcatdtknvqfvfdavtdviiknnlkdcglf

Sequence, based on observed residues (ATOM records):

>d1bofa2 c.37.1.8 (A:10-60,A:182-354) Transducin (alpha subunit) {Norway rat (Rattus norvegicus) [TaxId: 10116]}
kaaverskmidrnlredgekaarevkllllgagesgkstivkqmkiiheagXtgivethf
tfkdlhfkmfdvggvtaiifcvalsdydlmnrmhesmklfdsicnnkwftdtsiilflnk
kdlfeekikksplticypeyagsntyeeaaayiqcqfedlnkrkdtkeiythftcatdtk
nvqfvfdavtdviiknnlkdcglf

Timeline for d1bofa2:

• d1bofa2 first appeared (with stable ids) in SCOP 1.55, called d1bof_2
  
• d1bofa2 appears in SCOPe 2.03
  
• d1bofa2 appears in SCOPe 2.05
  
• d1bofa2 appears in the current release, SCOPe 2.08