SCOPe 2.06: Domain d5jp3b1: 5jp3 B:1-75

Lineage for d5jp3b1 (5jp3 B:1-75)

Root: SCOPe 2.06
Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
Superfamily d.15.1: Ubiquitin-like [54236] (11 families)
Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
Pfam PF00240
Protein Ubiquitin [54238] (8 species)
Species Human (Homo sapiens) [TaxId:9606] [54239] (209 PDB entries)
Uniprot P62988
identical sequence in many other species
Domain d5jp3b1: 5jp3 B:1-75 [320087]
Other proteins in same PDB: d5jp3b2, d5jp3d2, d5jp3f2, d5jp3h2
automated match to d3rula_

Details for d5jp3b1

PDB Entry: 5jp3 (more details), 2.9 Å

PDB Description: structure of xanthomonas campestris effector protein xopd bound to ubiquitin

PDB Compounds: (B:) Polyubiquitin-B

SCOPe Domain Sequences for d5jp3b1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5jp3b1 d.15.1.1 (B:1-75) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrg

SCOPe Domain Coordinates for d5jp3b1:

Click to download the PDB-style file with coordinates for d5jp3b1.
(The format of our PDB-style files is described here.)

Timeline for d5jp3b1: