SCOPe 2.08: Domain d5efha_: 5efh A:

Lineage for d5efha_ (5efh A:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.42: Arginase/deacetylase [52767] (1 superfamily)
   3 layers: a/b/a, parallel beta-sheet of 8 strands, order 21387456

4. Superfamily c.42.1: Arginase/deacetylase [52768] (3 families)

5. Family c.42.1.0: automated matches [191435] (1 protein)
   not a true family

6. Protein automated matches [190626] (14 species)
   not a true protein

7. Species Zebrafish (Danio rerio) [TaxId:7955] [319911] (55 PDB entries)

8. Domain d5efha_: 5efh A: [319985]
   automated match to d3c10c_
   complexed with br, edo, fks, gol, k, zn

Details for d5efha_

PDB Entry: 5efh, 2.16 Å

PDB Description: crystal structure of danio rerio histone deacetylase 6 catalytic domain 2 in complex with trifluoroketone transition state analogue

PDB Compounds: (A:) Hdac6 protein

SCOPe Domain Sequences for d5efha_:

Sequence; same for both SEQRES and ATOM records:

>d5efha_ c.42.1.0 (A:) automated matches {Zebrafish (Danio rerio) [TaxId: 7955]}
itglvydqrmmlhhnmwdshhpelpqrisrifsrheelrllsrchriparlateeelalc
hsskhisiikssehmkprdlnrlgdeynsifisnesytcallaagscfnsaqailtgqvr
navaivrppghhaekdtacgfcffntaaltaryaqsitreslrvlivdwdvhhgngtqhi
feeddsvlyislhryedgaffpnsedanydkvglgkgrgynvnipwnggkmgdpeymaaf
hhlvmpiarefapelvlvsagfdaargdplggfqvtpegyahlthqlmslaagrvliile
ggynltsisesmsmctsmllgdsppsldhltplktsatvsinnvlrahapfwsslr

Timeline for d5efha_:

• d5efha_ first appeared in SCOPe 2.06
  
• d5efha_ appears in SCOPe 2.07