Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2975208Fold d.129: TBP-like [55944] (11 superfamilies)
    beta-alpha-beta(4)-alpha
  4. 2975504Superfamily d.129.3: Bet v1-like [55961] (11 families) (S)
    contains a single copy of this fold with a alpha-beta2 insertion after the first helix; there is a cavity between the beta-sheet and the long C-terminal helix
  5. 2975670Family d.129.3.3: Ring hydroxylating alpha subunit catalytic domain [55969] (7 proteins)
    Pfam PF00848; contains a few insertion and C-terminal extension compared with Bet v1
  6. 2975760Protein automated matches [319939] (2 species)
    not a true protein

Species:

  1. 2975761Diaphorobacter sp. [TaxId:1302548] [319940] (1 PDB entry)
  2. 2975765Janthinobacterium sp. [TaxId:213804] [399623] (9 PDB entries)
    1. Domains for 6ll0:
      1. 2975786Domain d6ll0a2: 6ll0 A:143-384 [399624]
        Other proteins in same PDB: d6ll0a1, d6ll0b1, d6ll0c1
        automated match to d2de6a2
        complexed with 9ca, edo, fe2, fes, mg, peg, pge
      2. 2975787Domain d6ll0b2: 6ll0 B:143-384 [399664]
        Other proteins in same PDB: d6ll0a1, d6ll0b1, d6ll0c1
        automated match to d2de6a2
        complexed with 9ca, edo, fe2, fes, mg, peg, pge
      3. 2975788Domain d6ll0c2: 6ll0 C:143-384 [399643]
        Other proteins in same PDB: d6ll0a1, d6ll0b1, d6ll0c1
        automated match to d2de6a2
        complexed with 9ca, edo, fe2, fes, mg, peg, pge
    2. Domains for 6ll1:
      1. 2975776Domain d6ll1a2: 6ll1 A:143-384 [399721]
        Other proteins in same PDB: d6ll1a1, d6ll1b1, d6ll1c1
        automated match to d2de6a2
        complexed with dms, edo, fe2, fes, mg, oxy, peg, pge
      2. 2975777Domain d6ll1b2: 6ll1 B:143-384 [399856]
        Other proteins in same PDB: d6ll1a1, d6ll1b1, d6ll1c1
        automated match to d2de6a2
        complexed with dms, edo, fe2, fes, mg, oxy, peg, pge
      3. 2975778Domain d6ll1c2: 6ll1 C:143-384 [399830]
        Other proteins in same PDB: d6ll1a1, d6ll1b1, d6ll1c1
        automated match to d2de6a2
        complexed with dms, edo, fe2, fes, mg, oxy, peg, pge
    3. Domains for 6ll4:
      1. 2975779Domain d6ll4a2: 6ll4 A:143-384 [399695]
        Other proteins in same PDB: d6ll4a1, d6ll4b1, d6ll4c1
        automated match to d2de6a2
        complexed with 9g0, dms, edo, ehx, fe, fes, mg, peg, pge
      2. 2975780Domain d6ll4b2: 6ll4 B:143-384 [399645]
        Other proteins in same PDB: d6ll4a1, d6ll4b1, d6ll4c1
        automated match to d2de6a2
        complexed with 9g0, dms, edo, ehx, fe, fes, mg, peg, pge
      3. 2975781Domain d6ll4c2: 6ll4 C:143-384 [399748]
        Other proteins in same PDB: d6ll4a1, d6ll4b1, d6ll4c1
        automated match to d2de6a2
        complexed with 9g0, dms, edo, ehx, fe, fes, mg, peg, pge
    4. Domains for 6llf:
      1. 2975770Domain d6llfa2: 6llf A:143-384 [399834]
        Other proteins in same PDB: d6llfa1, d6llfa3, d6llfb1, d6llfb3, d6llfc1, d6llfc3
        automated match to d2de6a2
        complexed with edo, fe2, fes, gol, peg, pge, wbp
      2. 2975771Domain d6llfb2: 6llf B:143-384 [399738]
        Other proteins in same PDB: d6llfa1, d6llfa3, d6llfb1, d6llfb3, d6llfc1, d6llfc3
        automated match to d2de6a2
        complexed with edo, fe2, fes, gol, peg, pge, wbp
      3. 2975772Domain d6llfc2: 6llf C:143-384 [399725]
        Other proteins in same PDB: d6llfa1, d6llfa3, d6llfb1, d6llfb3, d6llfc1, d6llfc3
        automated match to d2de6a2
        complexed with edo, fe2, fes, gol, peg, pge, wbp
    5. Domains for 6llh:
      1. 2975773Domain d6llha2: 6llh A:143-384 [399691]
        Other proteins in same PDB: d6llha1, d6llha3, d6llhb1, d6llhb3, d6llhc1, d6llhc3
        automated match to d2de6a2
        complexed with act, bpy, edo, fe2, fes, gol, peg, pge
      2. 2975774Domain d6llhb2: 6llh B:143-384 [399711]
        Other proteins in same PDB: d6llha1, d6llha3, d6llhb1, d6llhb3, d6llhc1, d6llhc3
        automated match to d2de6a2
        complexed with act, bpy, edo, fe2, fes, gol, peg, pge
      3. 2975775Domain d6llhc2: 6llh C:143-384 [399754]
        Other proteins in same PDB: d6llha1, d6llha3, d6llhb1, d6llhb3, d6llhc1, d6llhc3
        automated match to d2de6a2
        complexed with act, bpy, edo, fe2, fes, gol, peg, pge
    6. Domain for 6llk:
    7. Domain for 6llm:
    8. Domains for 7bug:
      1. 2975766Domain d7buga2: 7bug A:143-384 [401861]
        Other proteins in same PDB: d7buga1, d7bugb1, d7bugc1
        automated match to d2de6a2
        complexed with 1pe, co3, fe2, fes, mg, mxe, p6g, peg, pg0, pg4, pge
      2. 2975767Domain d7bugb2: 7bug B:143-384 [401830]
        Other proteins in same PDB: d7buga1, d7bugb1, d7bugc1
        automated match to d2de6a2
        complexed with 1pe, co3, fe2, fes, mg, mxe, p6g, peg, pg0, pg4, pge
      3. 2975768Domain d7bugc2: 7bug C:143-384 [401767]
        Other proteins in same PDB: d7buga1, d7bugb1, d7bugc1
        automated match to d2de6a2
        complexed with 1pe, co3, fe2, fes, mg, mxe, p6g, peg, pg0, pg4, pge
    9. Domains for 7bui:
      1. 2975782Domain d7buia2: 7bui A:143-384 [401788]
        Other proteins in same PDB: d7buia1, d7buia3, d7buib1, d7buib3, d7buic1, d7buic3
        automated match to d2de6a2
        complexed with edo, fe2, fes, peg
      2. 2975783Domain d7buib2: 7bui B:143-384 [401888]
        Other proteins in same PDB: d7buia1, d7buia3, d7buib1, d7buib3, d7buic1, d7buic3
        automated match to d2de6a2
        complexed with edo, fe2, fes, peg
      3. 2975784Domain d7buic2: 7bui C:143-384 [401754]
        Other proteins in same PDB: d7buia1, d7buia3, d7buib1, d7buib3, d7buic1, d7buic3
        automated match to d2de6a2
        complexed with edo, fe2, fes, peg

More info for Protein automated matches from d.129.3.3: Ring hydroxylating alpha subunit catalytic domain

Timeline for Protein automated matches from d.129.3.3: Ring hydroxylating alpha subunit catalytic domain: