SCOPe 2.06: Domain d5k1ca_: 5k1c A:

Lineage for d5k1ca_ (5k1c A:)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.3: Cysteine proteinases [54000] (1 superfamily)
   consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn

4. Superfamily d.3.1: Cysteine proteinases [54001] (24 families)
   the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet

5. Family d.3.1.0: automated matches [191342] (1 protein)
   not a true family

6. Protein automated matches [190230] (20 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [187072] (42 PDB entries)

8. Domain d5k1ca_: 5k1c A: [319785]
   automated match to d3v6ca_
   complexed with po4, tam, zn

Details for d5k1ca_

PDB Entry: 5k1c, 3 Å

PDB Description: crystal structure of the uaf1/wdr20/usp12 complex

PDB Compounds: (A:) Ubiquitin carboxyl-terminal hydrolase 12

SCOPe Domain Sequences for d5k1ca_:

Sequence, based on SEQRES records:

>d5k1ca_ d.3.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
hyfglvnfgntcycnsvlqalyfcrpfrekvlayksqprkkeslltcladlfhsiatqkk
kvgvippkkfitrlrkenelfdnymqqdaheflnyllntiadilqeerkqekqngrlpng
nidnennnstpdptwvheifqgtltnetrcltcetisskdedfldlsvdveqntsithcl
rgfsntetlcseykyyceecrskqeahkrmkvkklpmilalhlkrfkymdqlhrytklsy
rvvfplelrlfntsgdatnpdrmydlvavvvhcgsgpnrghyiaivkshdfwllfdddiv
ekidaqaieefygltsdisknsesgyilfyqsrd

Sequence, based on observed residues (ATOM records):

>d5k1ca_ d.3.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
hyfglvnfgntcycnsvlqalyfcrpfrekvlayslltcladlfhsiatqvippkkfitr
lrkenelfdnymqqdaheflnyllntiadilqeerkqepdptwvheifqgtltnetrclt
cetisskdedfldlsvdveqntsithclrgfsntetlcseykyyceecrskqeahkrmkv
kklpmilalhlkrfkymdqlhrytklsyrvvfplelrlfntsgdatnpdrmydlvavvvh
cgsgpnrghyiaivkshdfwllfdddivekidaqaieefygltsdisknsesgyilfyqs
rd

Timeline for d5k1ca_:

• d5k1ca_ is new in SCOPe 2.06-stable
  
• d5k1ca_ appears in SCOPe 2.07
  
• d5k1ca_ appears in the current release, SCOPe 2.08