Lineage for d5j47a_ (5j47 A:)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2865683Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 2865684Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (27 families) (S)
    division into families based on beta-sheet topologies
  5. 2870969Family c.37.1.20: Extended AAA-ATPase domain [81269] (43 proteins)
    fold is similar to that of RecA, but lacks the last two strands, followed by a family-specific Arg-finger domain
  6. 2871357Protein automated matches [190766] (8 species)
    not a true protein
  7. 2871447Species Jc polyomavirus [TaxId:10632] [319763] (4 PDB entries)
  8. 2871448Domain d5j47a_: 5j47 A: [319764]
    automated match to d1svmc_
    complexed with 6jj, mes, zn

Details for d5j47a_

PDB Entry: 5j47 (more details), 1.99 Å

PDB Description: the x-ray structure of inhibitor bound to jcv helicase
PDB Compounds: (A:) large t antigen

SCOPe Domain Sequences for d5j47a_:

Sequence, based on SEQRES records: (download)

>d5j47a_ c.37.1.20 (A:) automated matches {Jc polyomavirus [TaxId: 10632]}
tkqvswklvtqyaldtkcedvfllmgmylnfqeapaacaacaaadqpnhfnhhekhyyna
qifadsknqksicqqavdtvaakqrvdslhmtreemlverfnflldkmdlifgahgnavl
eqymagvawihcllpqmdtviyeflkcivlnipkkrywlfkgpidsgkttlaaalldlcg
gkslnvnmplerlnfelgvgidqfmvvfedvkgtgaesrdlpsghgisnldclrdyldgs
vkvnlerkhqnkrtqvfppgivtmneysvprtlqarfvrqidfrpkaylrkslscseyll
ekrilqsgmtllllliwfrpvadfaaaiherivqwkerldleismytfstmkanvgmgap
ild

Sequence, based on observed residues (ATOM records): (download)

>d5j47a_ c.37.1.20 (A:) automated matches {Jc polyomavirus [TaxId: 10632]}
tkqvswklvtqyaldtkcedvfllmgmylnfqeapaacaacaaadqpnhfnhhekhyyna
qifadsknqksicqqavdtvaakqrvdslhmtreemlverfnflldkmdlifgahgnavl
eqymagvawihcllpqmdtviyeflkcivlnipkkrywlfkgpidsgkttlaaalldlcg
gkslnvnmplerlnfelgvgidqfmvvfedvkgtgaesrdlpsghgisnldclrdyldgs
vkvnlernkrtqvfppgivtmneysvprtlqarfvrqidfrpkaylrkslscseyllekr
ilqsgmtllllliwfrpvadfaaaiherivqwkerldleismytfstmkanvgmgapild

SCOPe Domain Coordinates for d5j47a_:

Click to download the PDB-style file with coordinates for d5j47a_.
(The format of our PDB-style files is described here.)

Timeline for d5j47a_: