SCOPe 2.08: Domain d5dy6b_: 5dy6 B:

Lineage for d5dy6b_ (5dy6 B:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.22: GFP-like [54510] (1 superfamily)
   beta-sheet folds into a barrel (n=11, S=14) around the central helix

4. Superfamily d.22.1: GFP-like [54511] (3 families)

5. Family d.22.1.1: Fluorescent proteins [54512] (6 proteins)

6. Protein Green fluorescent protein, GFP [54513] (6 species)

7. Species Jellyfish (Aequorea victoria) [TaxId:6100] [54514] (285 PDB entries)
   Uniprot P42212

8. Domain d5dy6b_: 5dy6 B: [319527]
   automated match to d2b3pa_
   complexed with so4

Details for d5dy6b_

PDB Entry: 5dy6, 2.66 Å

PDB Description: enhanced superfolder gfp with dbco at 148

PDB Compounds: (B:) Green fluorescent protein

SCOPe Domain Sequences for d5dy6b_:

Sequence; same for both SEQRES and ATOM records:

>d5dy6b_ d.22.1.1 (B:) Green fluorescent protein, GFP {Jellyfish (Aequorea victoria) [TaxId: 6100]}
elftgvvpilveldgdvnghkfsvrgegegdatngkltlkficttgklpvpwptlvttlg
ygvqcfsrypdhmkrhdffksampegyvqertisfkddgtyktraevkfegdtlvnriel
kgidfkedgnilghkleynfnsxnvyitadkqkngikanfkirhnvedgsvqladhyqqn
tpigdgpvllpdnhylstqsvlskdpnekrdhmvllefvtaagithg

Timeline for d5dy6b_:

• d5dy6b_ first appeared in SCOPe 2.06
  
• d5dy6b_ appears in SCOPe 2.07