SCOPe 2.08: Domain d5bmvd2: 5bmv D:246-441

Lineage for d5bmvd2 (5bmv D:246-441)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.79: Bacillus chorismate mutase-like [55297] (9 superfamilies)
   core: beta-alpha-beta-alpha-beta(2); mixed beta-sheet: order: 1423, strand 4 is antiparallel to the rest

4. Superfamily d.79.2: Tubulin C-terminal domain-like [55307] (2 families)

5. Family d.79.2.1: Tubulin, C-terminal domain [55308] (4 proteins)

6. Protein Tubulin beta-subunit [55313] (2 species)

7. Species Pig (Sus scrofa) [TaxId:9823] [55314] (9 PDB entries)

8. Domain d5bmvd2: 5bmv D:246-441 [319508]
   Other proteins in same PDB: d5bmva1, d5bmva2, d5bmvb1, d5bmvc1, d5bmvc2, d5bmvd1, d5bmve_, d5bmvf1, d5bmvf2, d5bmvf3
   automated match to d1sa0b2
   complexed with acp, ca, gdp, gol, gtp, mes, mg, vlb

Details for d5bmvd2

PDB Entry: 5bmv, 2.5 Å

PDB Description: crystal structure of tubulin-stathmin-ttl-vinblastine complex

PDB Compounds: (D:) Tubulin beta chain

SCOPe Domain Sequences for d5bmvd2:

Sequence, based on SEQRES records:

>d5bmvd2 d.79.2.1 (D:246-441) Tubulin beta-subunit {Pig (Sus scrofa) [TaxId: 9823]}
gqlnadlrklavnmvpfprlhffmpgfapltsrgsqqyraltvpeltqqmfdaknmmaac
dprhgryltvaavfrgrmsmkevdeqmlnvqnknssyfvewipnnvktavcdipprglkm
satfignstaiqelfkriseqftamfrrkaflhwytgegmdemefteaesnmndlvseyq
qyqdatad

Sequence, based on observed residues (ATOM records):

>d5bmvd2 d.79.2.1 (D:246-441) Tubulin beta-subunit {Pig (Sus scrofa) [TaxId: 9823]}
gqlnadlrklavnmvpfprlhffmpgfapltltvpeltqqmfdaknmmaacdprhgrylt
vaavfrgrmsmkevdeqmlnvqnknssyfvewipnnvktavcdipprglkmsatfignst
aiqelfkriseqftamfrrkaflhwytgegmdemefteaesnmndlvseyqqyqdatad

Timeline for d5bmvd2:

• d5bmvd2 first appeared in SCOPe 2.06
  
• d5bmvd2 appears in SCOPe 2.07