Lineage for d5iida_ (5iid A:)

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2316812Fold a.29: Bromodomain-like [47363] (15 superfamilies)
    4 helices; bundle; minor mirror variant of up-and-down topology
  4. 2316813Superfamily a.29.2: Bromodomain [47370] (2 families) (S)
  5. 2316976Family a.29.2.0: automated matches [191428] (1 protein)
    not a true family
  6. 2316977Protein automated matches [190615] (11 species)
    not a true protein
  7. 2316984Species Human (Homo sapiens) [TaxId:9606] [187641] (716 PDB entries)
  8. 2317795Domain d5iida_: 5iid A: [319055]
    automated match to d3g0ja_
    complexed with 6bk

Details for d5iida_

PDB Entry: 5iid (more details), 2.4 Å

PDB Description: crystal structure of the fifth bromodomain of human polybromo (pb1) in complex with 2-(3,4-dihydroxyphenyl)-5-hydroxy-4h-chromen-4-one
PDB Compounds: (A:) Protein polybromo-1

SCOPe Domain Sequences for d5iida_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5iida_ a.29.2.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
skymtpmqqklnevyeavknytdkrgrrlsaiflrlpsrselpdyyltikkpmdmekirs
hmmankyqdidsmvedfvmmfnnactynepesliykdalvlhkvlletrrdlegd

SCOPe Domain Coordinates for d5iida_:

Click to download the PDB-style file with coordinates for d5iida_.
(The format of our PDB-style files is described here.)

Timeline for d5iida_: