Lineage for d5byfb1 (5byf B:14-322)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2904325Fold c.72: Ribokinase-like [53612] (3 superfamilies)
    core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
    potential superfamily: members of this fold have similar functions but different ATP-binding sites
  4. 2904326Superfamily c.72.1: Ribokinase-like [53613] (6 families) (S)
    has extra strand located between strands 2 and 3
  5. 2904327Family c.72.1.1: Ribokinase-like [53614] (10 proteins)
    automatically mapped to Pfam PF00294
  6. 2904399Protein Ribokinase [53615] (3 species)
  7. 2904412Species Human (Homo sapiens) [TaxId:9606] [142709] (11 PDB entries)
    Uniprot Q9H477 15-322
  8. 2904432Domain d5byfb1: 5byf B:14-322 [318667]
    Other proteins in same PDB: d5byfa2, d5byfb2
    automated match to d2fv7a1
    complexed with amp, cl, na

Details for d5byfb1

PDB Entry: 5byf (more details), 2 Å

PDB Description: crystal structure of human ribokinase in complex with amp
PDB Compounds: (B:) ribokinase

SCOPe Domain Sequences for d5byfb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5byfb1 c.72.1.1 (B:14-322) Ribokinase {Human (Homo sapiens) [TaxId: 9606]}
evaavvvvgscmtdlvsltsrlpktgetihghkffigfggkganqcvqaarlgamtsmvc
kvgkdsfgndyienlkqndisteftyqtkdaatgtasiivnnegqniivivaganlllnt
edlraaanvisrakvmvcqleitpatslealtmarrsgvktlfnpapaiadldpqfytls
dvfccneseaeiltgltvgsaadageaalvllkrgcqvviitlgaegcvvlsqtepepkh
iptekvkavdttgagdsfvgalafylayypnlsledmlnrsnfiaavsvqaagtqssypy
kkdlpltlf

SCOPe Domain Coordinates for d5byfb1:

Click to download the PDB-style file with coordinates for d5byfb1.
(The format of our PDB-style files is described here.)

Timeline for d5byfb1:

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d5byfb2