SCOPe 2.08: Domain d5c3zb1: 5c3z B:10-322

Lineage for d5c3zb1 (5c3z B:10-322)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.72: Ribokinase-like [53612] (3 superfamilies)
   core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
   potential superfamily: members of this fold have similar functions but different ATP-binding sites

4. Superfamily c.72.1: Ribokinase-like [53613] (6 families)
   has extra strand located between strands 2 and 3

5. Family c.72.1.1: Ribokinase-like [53614] (10 proteins)
   automatically mapped to Pfam PF00294

6. Protein Ribokinase [53615] (3 species)

7. Species Human (Homo sapiens) [TaxId:9606] [142709] (11 PDB entries)
   Uniprot Q9H477 15-322

8. Domain d5c3zb1: 5c3z B:10-322 [318609]
   Other proteins in same PDB: d5c3za2, d5c3zb2
   automated match to d2fv7a1
   complexed with acp, cl, na

Details for d5c3zb1

PDB Entry: 5c3z, 1.9 Å

PDB Description: crystal structure of human ribokinase in complex with amppcp in c2 spacegroup

PDB Compounds: (B:) ribokinase

SCOPe Domain Sequences for d5c3zb1:

Sequence; same for both SEQRES and ATOM records:

>d5c3zb1 c.72.1.1 (B:10-322) Ribokinase {Human (Homo sapiens) [TaxId: 9606]}
qwqeevaavvvvgscmtdlvsltsrlpktgetihghkffigfggkganqcvqaarlgamt
smvckvgkdsfgndyienlkqndisteftyqtkdaatgtasiivnnegqniivivaganl
llntedlraaanvisrakvmvcqleitpatslealtmarrsgvktlfnpapaiadldpqf
ytlsdvfccneseaeiltgltvgsaadageaalvllkrgcqvviitlgaegcvvlsqtep
epkhiptekvkavdttgagdsfvgalafylayypnlsledmlnrsnfiaavsvqaagtqs
sypykkdlpltlf

Timeline for d5c3zb1:

• d5c3zb1 first appeared in SCOPe 2.06
  
• d5c3zb1 appears in SCOPe 2.07