SCOPe 2.08: Domain d1dekb_: 1dek B:

Lineage for d1dekb_ (1dek B:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (27 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.1: Nucleotide and nucleoside kinases [52541] (21 proteins)
   parallel beta-sheet of 5 strands, order 23145

6. Protein Deoxynucleoside monophosphate kinase [52546] (1 species)
   contains insert 4-helical bundle subdomain, residues 35-145

7. Species Bacteriophage T4 [TaxId:10665] [52547] (2 PDB entries)

8. Domain d1dekb_: 1dek B: [31843]
   complexed with dgp, mg
   has additional subdomain(s) that are not in the common domain

Details for d1dekb_

PDB Entry: 1dek, 2 Å

PDB Description: deoxynucleoside monophosphate kinase complexed with deoxy-gmp

PDB Compounds: (B:) deoxynucleoside monophosphate kinase

SCOPe Domain Sequences for d1dekb_:

Sequence, based on SEQRES records:

>d1dekb_ c.37.1.1 (B:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
mkliflsgvkrsgkdttadfimsnysavkyqlagpikdalayawgvfaantdypcltrke
fegidydretnlnltklevitimeqafcylngkspikgvfvfddegkesvnfvafnkitd
vinniedqwsvrrlmqalgtdlivnnfdrmywvklfaldyldkfnsgydyyivpdtrqdh
emdaaramgatvihvvrpgqksndthiteaglpirdgdlvitndgsleelfskikntlkv
l

Sequence, based on observed residues (ATOM records):

>d1dekb_ c.37.1.1 (B:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
mkliflsgvkrsgkdttadfimsnysavkyqlagpikdalayawgvfaantdypcltrke
fegidydretnlnltklevitimeqafcylngkspikgvfvfddegkesvnfvafnkitd
vinniedqwsvrrlmqalgtdlivnnfdrmywvklfaldyldkfnsgydyyivpdtrqdh
emdaaramgatvihvvrpgaglpirdgdlvitndgsleelfskikntlkvl

Timeline for d1dekb_:

• d1dekb_ first appeared (with stable ids) in SCOP 1.55
  
• d1dekb_ appears in SCOPe 2.07