Lineage for Species: Saffold virus [TaxId: 434309]

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2409884Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2410108Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. 2410109Family b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) [88634] (10 protein domains)
    the order of the chains N-VP0-VP3-VP1-C is as in the polyprotein; VP0 is cleaved later upon capsid assembly to VP4 and VP2
    there is a different order in the shuffled genome of insect picorna-like proteins (Cricket paralysis virus)
  6. 2410393Protein automated matches [190854] (15 species)
    not a true protein
  7. 2410477Species Saffold virus [TaxId:434309] [318368] (2 PDB entries)

PDB entries in Species: Saffold virus [TaxId: 434309]:

  1. Domain(s) for 5cfc:
    1. 2410480Domain d5cfca_: 5cfc A: [318440]
      automated match to d1tme1_
    2. 2410481Domain d5cfcb_: 5cfc B: [318369]
      automated match to d1tmf3_
  2. Domain(s) for 5cfd:
    1. 2410478Domain d5cfda_: 5cfd A: [318593]
      automated match to d1tme1_
    2. 2410479Domain d5cfdb_: 5cfd B: [318483]
      automated match to d1tmf3_

More info for Species Saffold virus [TaxId:434309] from b.121.4.1 automated matches

Timeline for Species Saffold virus [TaxId:434309] from b.121.4.1 automated matches: