Lineage for d5ioqa1 (5ioq A:1-215)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 3006302Fold d.207: Thymidylate synthase-complementing protein Thy1 [69795] (1 superfamily)
    complex alpha+beta fold; contains antiparallel 5-stranded beta-sheet: order 12354
  4. 3006303Superfamily d.207.1: Thymidylate synthase-complementing protein Thy1 [69796] (2 families) (S)
    automatically mapped to Pfam PF02511
  5. 3006304Family d.207.1.1: Thymidylate synthase-complementing protein Thy1 [69797] (2 proteins)
  6. 3006305Protein Thy1 homologue [69798] (1 species)
  7. 3006306Species Thermotoga maritima [TaxId:2336] [69799] (29 PDB entries)
    TM0449
  8. 3006349Domain d5ioqa1: 5ioq A:1-215 [318246]
    Other proteins in same PDB: d5ioqa2, d5ioqc2
    automated match to d1o26c_
    complexed with dur, fad, pge

Details for d5ioqa1

PDB Entry: 5ioq (more details), 1.93 Å

PDB Description: flavin-dependent thymidylate synthase in complex with fad and deoxyuridine
PDB Compounds: (A:) Thymidylate synthase thyX

SCOPe Domain Sequences for d5ioqa1:

Sequence, based on SEQRES records: (download)

>d5ioqa1 d.207.1.1 (A:1-215) Thy1 homologue {Thermotoga maritima [TaxId: 2336]}
mkidildkgfvelvdvmgndlsavraarvsfdmglkdeerdrhlieylmkhghetpfehi
vftfhvkapifvarqwfrhriasynelsgrysklsyefyipsperlegykttippervte
kiseivdkayrtyleliesgvprevarivlplnlytrffwtvnarslmnflnlradshaq
weiqqyalaiarifkekcpwtfeaflkyaykgdil

Sequence, based on observed residues (ATOM records): (download)

>d5ioqa1 d.207.1.1 (A:1-215) Thy1 homologue {Thermotoga maritima [TaxId: 2336]}
mkidildkgfvelvdvmgndlsavraarvsfeerdrhlieylmkhghetpfehivftfhv
kapifvarqwfrhriasynelsgrysklsyefyipsperlegykttippervtekiseiv
dkayrtyleliesgvprevarivlplnlytrffwtvnarslmnflnlradshaqweiqqy
alaiarifkekcpwtfeaflkyaykgdil

SCOPe Domain Coordinates for d5ioqa1:

Click to download the PDB-style file with coordinates for d5ioqa1.
(The format of our PDB-style files is described here.)

Timeline for d5ioqa1: