SCOPe 2.06: Domain d5jvdc1: 5jvd C:2-245

Lineage for d5jvdc1 (5jvd C:2-245)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.32: Tubulin nucleotide-binding domain-like [52489] (1 superfamily)
   3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456

4. Superfamily c.32.1: Tubulin nucleotide-binding domain-like [52490] (2 families)
   automatically mapped to Pfam PF00091

5. Family c.32.1.1: Tubulin, GTPase domain [52491] (4 proteins)

6. Protein automated matches [226837] (7 species)
   not a true protein

7. Species Cow (Bos taurus) [TaxId:9913] [226564] (48 PDB entries)

8. Domain d5jvdc1: 5jvd C:2-245 [318243]
   Other proteins in same PDB: d5jvda2, d5jvdb2, d5jvdc2, d5jvdd2, d5jvde_, d5jvdf1, d5jvdf2, d5jvdf3
   automated match to d4ihja1
   complexed with 6nl, acp, ca, gdp, gol, gtp, mes, mg

Details for d5jvdc1

PDB Entry: 5jvd, 2.39 Å

PDB Description: tubulin-tub092 complex

PDB Compounds: (C:) Tubulin alpha-1B chain

SCOPe Domain Sequences for d5jvdc1:

Sequence; same for both SEQRES and ATOM records:

>d5jvdc1 c.32.1.1 (C:2-245) automated matches {Cow (Bos taurus) [TaxId: 9913]}
recisihvgqagvqignacwelyclehgiqpdgqmpsdktigggddsfntffsetgagkh
vpravfvdleptvidevrtgtyrqlfhpeqlitgkedaannyarghytigkeiidlvldr
irkladqctglqgflvfhsfgggtgsgftsllmerlsvdygkksklefsiypapqvstav
vepynsiltthttlehsdcafmvdneaiydicrrnldierptytnlnrlisqivssitas
lrfd

Timeline for d5jvdc1:

• d5jvdc1 is new in SCOPe 2.06-stable
  
• d5jvdc1 appears in SCOPe 2.07
  
• d5jvdc1 appears in the current release, SCOPe 2.08