Lineage for d5cb7b_ (5cb7 B:)

  1. Root: SCOPe 2.06
  2. 2021373Class b: All beta proteins [48724] (177 folds)
  3. 2049732Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
    sandwich; 12-14 strands in 2 sheets; complex topology
  4. 2049733Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (26 families) (S)
  5. 2051795Family b.29.1.0: automated matches [191363] (1 protein)
    not a true family
  6. 2051796Protein automated matches [190437] (53 species)
    not a true protein
  7. 2052292Species Rotavirus a (strain human/japan/k8/1977 g1-p3a[9]-ix-rx-cx-mx-a1-nx-tx-ex-h3) [TaxId:39012] [318080] (2 PDB entries)
  8. 2052294Domain d5cb7b_: 5cb7 B: [318083]
    automated match to d2p3ka_
    complexed with a2g, cl, fuc, gal, gla, gol

Details for d5cb7b_

PDB Entry: 5cb7 (more details), 1.35 Å

PDB Description: crystallographic structure of human rotavirus k8 vp8* in complex with a-type hbga
PDB Compounds: (B:) Outer capsid protein VP4

SCOPe Domain Sequences for d5cb7b_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5cb7b_ b.29.1.0 (B:) automated matches {Rotavirus a (strain human/japan/k8/1977 g1-p3a[9]-ix-rx-cx-mx-a1-nx-tx-ex-h3) [TaxId: 39012]}
ldgpyqptslnlpvdywmliaptregkvaegtnttdrwfacvlvepnvqntqrqyvldgq
nvqlhvsndsstswkfilfikltpdgtytqystlstphklcawmkrdnrvywyqgatpna
sesyyltinndnsnvssdaefylipqsqtamctqyinngl

SCOPe Domain Coordinates for d5cb7b_:

Click to download the PDB-style file with coordinates for d5cb7b_.
(The format of our PDB-style files is described here.)

Timeline for d5cb7b_: