Lineage for d5jaeb_ (5jae B:)

  1. Root: SCOPe 2.06
  2. 2250849Class f: Membrane and cell surface proteins and peptides [56835] (59 folds)
  3. 2256405Fold f.54: SNF-like [161069] (1 superfamily)
    12 transmembrane helices; duplication: consists of two structurally similar halves
  4. 2256406Superfamily f.54.1: SNF-like [161070] (1 family) (S)
  5. 2256407Family f.54.1.1: SNF-like [161071] (2 proteins)
    Pfam PF00209; Sodium:neurotransmitter symporter
  6. 2256408Protein Na(+):neurotransmitter symporter homologue LeuT [161072] (1 species)
  7. 2256409Species Aquifex aeolicus [TaxId:63363] [161073] (38 PDB entries)
    Uniprot O67854 5-513
  8. 2256448Domain d5jaeb_: 5jae B: [317986]
    automated match to d4hmka_
    complexed with bog

Details for d5jaeb_

PDB Entry: 5jae (more details), 2.5 Å

PDB Description: leut in the outward-oriented, na+-free return state, p21 form at ph 6.5
PDB Compounds: (B:) Transporter

SCOPe Domain Sequences for d5jaeb_:

Sequence, based on SEQRES records: (download)

>d5jaeb_ f.54.1.1 (B:) Na(+):neurotransmitter symporter homologue LeuT {Aquifex aeolicus [TaxId: 63363]}
krehwatrlglilamagnavglgnflrfpvqaaengggafmipyiiafllvgiplmwiew
amgryggaqghgttpaifyllwrnrfakilgvfglwiplvvaiyyvyieswtlgfaikfl
vglvpepppnatdpdsilrpfkeflysyigvpkgdepilkpslfayivflitmfinvsil
irgiskgierfakiamptlfilavflvirvflletpngtaadglnflwtpdfeklkdpgv
wiaavgqifftlslgfgaiityasyvrkdqdivlsgltaatlnekaevilggsisipaav
affgvanavaiakagafnlgfitlpaifsqtaggtflgflwffllffagltssiaimqpm
iafledelklsrkhavlwtaaivffsahlvmflnksldemdfwagtigvvffglteliif
fwifgadkaweeinrggiikvpriyyyvmryitpaflavllvvwareyipkimeethwtv
witrfyiiglflfltflvflaerrrnh

Sequence, based on observed residues (ATOM records): (download)

>d5jaeb_ f.54.1.1 (B:) Na(+):neurotransmitter symporter homologue LeuT {Aquifex aeolicus [TaxId: 63363]}
krehwatrlglilamagnavglgnflrfpvqaaengggafmipyiiafllvgiplmwiew
amgryggaqghgttpaifyllwrnrfakilgvfglwiplvvaiyyvyieswtlgfaikfl
vglvpepppnatdpdsilrpfkeflysyigvpkgdepilkpslfayivflitmfinvsil
irgiskgierfakiamptlfilavflvirvflletpngtaadglnflwtpdfeklkdpgv
wiaavgqifftlslgfgaiityasyvrkdqdivlsgltaatlnekaevilggsisipaav
affgvanavaiakagafnlgfitlpaifsqtaggtflgflwffllffagltssiaimqpm
iafledelklsrkhavlwtaaivffsahlvmflnksldemdfwagtigvvffglteliif
fwifgadkaweeinrggiikvpriyyyvmryitpaflavllvvwareyipkihwtvwitr
fyiiglflfltflvflaerrrnh

SCOPe Domain Coordinates for d5jaeb_:

Click to download the PDB-style file with coordinates for d5jaeb_.
(The format of our PDB-style files is described here.)

Timeline for d5jaeb_: