Lineage for d1poxb2 (1pox B:9-182)

  1. Root: SCOPe 2.08
  2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. Fold c.36: Thiamin diphosphate-binding fold (THDP-binding) [52517] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 213465
  4. Superfamily c.36.1: Thiamin diphosphate-binding fold (THDP-binding) [52518] (9 families) (S)
    there are two different functional modules of this fold: pyridine-binding (Pyr) and pyrophosphate-binding (PP) modules
    two Pyr and two PP modules assemble together in a conserved heterotetrameric core that binds two THDP coenzyme molecules
  5. Family c.36.1.5: Pyruvate oxidase and decarboxylase Pyr module [88724] (8 proteins)
    the N-terminal, Pyr module is separated from the C-terminal, PP module by an alpha/beta domain of Rossmann-like topology
    automatically mapped to Pfam PF02776
  6. Protein Pyruvate oxidase [88729] (2 species)
  7. Species Lactobacillus plantarum [TaxId:1590] [88730] (2 PDB entries)
  8. Domain d1poxb2: 1pox B:9-182 [31795]
    Other proteins in same PDB: d1poxa1, d1poxa3, d1poxb1, d1poxb3
    complexed with fad, gol, mg, na, tpp; mutant

Details for d1poxb2

PDB Entry: 1pox (more details), 2.1 Å

PDB Description: the refined structures of a stabilized mutant and of wild-type pyruvate oxidase from lactobacillus plantarum
PDB Compounds: (B:) Pyruvate oxidase

SCOPe Domain Sequences for d1poxb2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1poxb2 c.36.1.5 (B:9-182) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]}
tnilagaavikvleawgvdhlygipggsinsimdalsaerdrihyiqvrheevgamaaaa
dakltgkigvcfgsagpggthlmnglydaredhvpvlaligqfgttgmnmdtfqemnenp
iyadvadynvtavnaatlphvideairrayahqgvavvqipvdlpwqqisaedw

SCOPe Domain Coordinates for d1poxb2 are not available.

Timeline for d1poxb2:

View in 3D
Domains from same chain:
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d1poxb1, d1poxb3
View in 3D
Domains from other chains:
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d1poxa1, d1poxa2, d1poxa3